Conservation of cofitness between CSW01_06750 and CSW01_16835 in Vibrio cholerae E7946 ATCC 55056

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06750 2-methylaconitate cis-trans isomerase PrpF 1.0 CSW01_16835 catabolite repressor/activator 0.64 18
Pseudomonas sp. SVBP6 0.72 COO64_RS09915 prpF 2-methylaconitate cis-trans isomerase PrpF 0.45 COO64_RS11270 cra catabolite repressor/activator low > 93
Pseudomonas stutzeri RCH2 0.71 Psest_2318 probable AcnD-accessory protein PrpF 0.45 Psest_3356 D-fructose-responsive transcription factor — —
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF 0.43 PFLU_RS04005 catabolite repressor/activator low > 109
Pseudomonas fluorescens SBW25 0.71 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF 0.43 PFLU_RS04005 catabolite repressor/activator low > 109
Pseudomonas simiae WCS417 0.71 PS417_21065 3-methylitaconate isomerase 0.43 PS417_03960 transcriptional regulator — —
Pseudomonas sp. DMC3 0.71 GFF5233 2-methyl-aconitate isomerase 0.44 GFF5002 Catabolite repressor/activator low > 89
Pseudomonas putida KT2440 0.70 PP_2337 aconitate isomerase 0.41 PP_0792 catabolite repressor-activator, DNA-binding transcriptional dual regulator low > 96
Pseudomonas orientalis W4I3 0.70 QF045_RS22890 2-methylaconitate cis-trans isomerase PrpF 0.43 QF045_RS06935 catabolite repressor/activator low > 93
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_2088 2-methylaconitate cis-trans isomerase 0.46 Psyr_0820 transcriptional regulator, LacI family low > 86
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_3822 2-methylaconitate cis-trans isomerase 0.45 Pf1N1B4_1147 Fructose repressor FruR, LacI family — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_2088 2-methylaconitate cis-trans isomerase 0.46 Psyr_0820 transcriptional regulator, LacI family low > 86
Pseudomonas sp. BP01 0.70 JOY50_RS25735 prpF 2-methylaconitate cis-trans isomerase PrpF 0.41 JOY50_RS19320 cra catabolite repressor/activator low > 84
Pseudomonas lactucae CFBP13502 0.70 GEMAOFIL_04358 2-methyl-aconitate isomerase 0.39 GEMAOFIL_00996 Catabolite repressor/activator low > 96
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_4115 2-methylaconitate cis-trans isomerase 0.42 PfGW456L13_5077 Fructose repressor FruR, LacI family low > 87
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_00885 3-methylitaconate isomerase 0.45 AO353_05490 transcriptional regulator low > 101
Pseudomonas sp. RS175 0.69 PFR28_02924 2-methyl-aconitate isomerase 0.45 PFR28_00104 Catabolite repressor/activator low > 88
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_6064 2-methylaconitate isomerase 0.45 Pf6N2E2_3340 Fructose repressor FruR, LacI family low > 103
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_20880 3-methylitaconate isomerase 0.45 AO356_07340 transcriptional regulator low > 104
Pseudomonas aeruginosa PA14 0.67 IKLFDK_03430 2-methylaconitate cis-trans isomerase PrpF 0.44 IKLFDK_18185 catabolite repressor/activator low > 98
Pseudomonas aeruginosa PUPa3 0.67 DQ20_RS44320 prpF;go_process=propionate 2-methylaconitate cis-trans isomerase PrpF 0.44 DQ20_RS41950 cra;go_function=DNA catabolite repressor/activator low > 101
Pseudomonas aeruginosa MRSN321 0.67 DY961_RS08530 prpF;go_process=propionate 2-methylaconitate cis-trans isomerase PrpF 0.44 DY961_RS15195 cra;go_function=DNA catabolite repressor/activator low > 100
Rahnella sp. WP5 0.27 EX31_RS10210 4-oxalomesaconate tautomerase 0.42 EX31_RS03655 catabolite repressor/activator low > 89
Klebsiella michiganensis M5al 0.24 BWI76_RS14180 hypothetical protein 0.42 BWI76_RS04705 DNA-binding transcriptional regulator FruR low > 92
Erwinia amylovora T8 0.23 OLJFJH_13345 4-oxalomesaconate tautomerase 0.40 OLJFJH_01270 catabolite repressor/activator low > 58
Agrobacterium fabrum C58 0.22 Atu4263 hypothetical protein 0.14 Atu4743 LacI family transcriptional regulator low > 89
Klebsiella pneumoniae MKP103 0.22 KDGMDA_08375 4-oxalomesaconate tautomerase 0.41 KDGMDA_12935 catabolite repressor/activator low > 95
Escherichia coli BW25113 0.20 b0769 ybhH hypothetical protein (NCBI) 0.42 b0080 fruR DNA-binding transcriptional dual regulator (NCBI) low > 76
Escherichia fergusonii Becca 0.20 EFB2_03337 Putative isomerase YbhH 0.42 EFB2_03967 Catabolite repressor/activator low > 86
Escherichia coli ECRC62 0.20 BNILDI_21090 ybhH 4-oxalomesaconate tautomerase 0.41 BNILDI_08580 cra catabolite repressor/activator low > 75
Escherichia coli Nissle 1917 0.20 ECOLIN_RS04095 4-oxalomesaconate tautomerase 0.42 ECOLIN_RS00430 catabolite repressor/activator — —
Escherichia coli ECRC100 0.20 OKFHMN_06665 ybhH 4-oxalomesaconate tautomerase 0.41 OKFHMN_10685 cra catabolite repressor/activator low > 79
Escherichia coli ECRC101 0.20 MCAODC_25885 ybhH 4-oxalomesaconate tautomerase 0.41 MCAODC_01200 cra catabolite repressor/activator low > 87
Escherichia coli ECOR27 0.20 NOLOHH_23095 ybhH 4-oxalomesaconate tautomerase 0.41 NOLOHH_03030 cra catabolite repressor/activator low > 76
Escherichia coli ECRC98 0.20 JDDGAC_10320 ybhH 4-oxalomesaconate tautomerase 0.41 JDDGAC_14280 cra catabolite repressor/activator low > 87
Escherichia coli ECRC99 0.20 KEDOAH_21300 ybhH 4-oxalomesaconate tautomerase 0.41 KEDOAH_17470 cra catabolite repressor/activator — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_02944 4-oxalomesaconate tautomerase 0.42 OHPLBJKB_03579 Catabolite repressor/activator low > 74
Escherichia coli ECRC102 0.20 NIAGMN_04715 ybhH 4-oxalomesaconate tautomerase 0.41 NIAGMN_08535 cra catabolite repressor/activator low > 80
Dickeya dadantii 3937 0.19 DDA3937_RS07810 4-oxalomesaconate tautomerase 0.42 DDA3937_RS18095 catabolite repressor/activator 0.36 66

Not shown: 38 genomes with orthologs for CSW01_06750 only; 13 genomes with orthologs for CSW01_16835 only