Conservation of cofitness between CSW01_15330 and CSW01_13960 in Vibrio cholerae E7946 ATCC 55056

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_15330 glycine dehydrogenase (decarboxylating) 1.0 CSW01_13960 potassium uptake protein TrkH 0.70 15
Alteromonas macleodii MIT1002 0.63 MIT1002_02971 Glycine dehydrogenase [decarboxylating] 0.70 MIT1002_00016 Trk system potassium uptake protein TrkH — —
Dechlorosoma suillum PS 0.60 Dsui_2737 glycine dehydrogenase, decarboxylating 0.41 Dsui_0807 Trk-type K+ transport system, membrane component low > 51
Klebsiella pneumoniae MKP103 0.59 KDGMDA_04370 aminomethyl-transferring glycine dehydrogenase 0.66 KDGMDA_09870 Trk system potassium transporter TrkH low > 95
Enterobacter asburiae PDN3 0.59 EX28DRAFT_2955 glycine dehydrogenase (decarboxylating) 0.66 EX28DRAFT_4513 Trk-type K+ transport systems, membrane components low > 76
Pantoea sp. MT58 0.59 IAI47_03775 aminomethyl-transferring glycine dehydrogenase 0.67 IAI47_18215 Trk system potassium transporter TrkH low > 76
Klebsiella michiganensis M5al 0.59 BWI76_RS23870 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) 0.66 BWI76_RS01385 potassium transporter low > 92
Pantoea agglomerans CFBP13505 P0401 0.59 PagCFBP13505_RS15925 aminomethyl-transferring glycine dehydrogenase 0.67 PagCFBP13505_RS15190 Trk system potassium transporter TrkH low > 74
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_0545 glycine dehydrogenase (decarboxylating) 0.59 B158DRAFT_0394 potassium uptake protein, TrkH family — —
Enterobacter sp. TBS_079 0.59 MPMX20_03762 Glycine dehydrogenase (decarboxylating) 0.66 MPMX20_04433 Trk system potassium uptake protein TrkH low > 85
Escherichia coli ECOR27 0.59 NOLOHH_11445 gcvP aminomethyl-transferring glycine dehydrogenase 0.66 NOLOHH_06360 trkH Trk system potassium transporter TrkH low > 76
Escherichia coli Nissle 1917 0.59 ECOLIN_RS16165 aminomethyl-transferring glycine dehydrogenase 0.66 ECOLIN_RS22195 Trk system potassium transporter TrkH low > 55
Escherichia coli ECOR38 0.59 HEPCGN_18820 gcvP aminomethyl-transferring glycine dehydrogenase 0.66 HEPCGN_12860 trkH Trk system potassium transporter TrkH low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_00812 Glycine dehydrogenase (decarboxylating) 0.66 OHPLBJKB_04204 Trk system potassium uptake protein TrkH low > 74
Escherichia coli ECRC99 0.59 KEDOAH_08610 gcvP aminomethyl-transferring glycine dehydrogenase 0.66 KEDOAH_13920 trkH Trk system potassium transporter TrkH — —
Escherichia coli BW25113 0.59 b2903 gcvP glycine dehydrogenase (NCBI) 0.66 b3849 trkH potassium transporter (NCBI) low > 76
Escherichia coli ECRC100 0.59 OKFHMN_19530 gcvP aminomethyl-transferring glycine dehydrogenase 0.66 OKFHMN_14230 trkH Trk system potassium transporter TrkH — —
Escherichia coli ECRC98 0.59 JDDGAC_23170 gcvP aminomethyl-transferring glycine dehydrogenase 0.66 JDDGAC_17855 trkH Trk system potassium transporter TrkH — —
Escherichia coli ECRC102 0.59 NIAGMN_17295 gcvP aminomethyl-transferring glycine dehydrogenase 0.66 NIAGMN_11985 trkH Trk system potassium transporter TrkH — —
Escherichia coli ECRC101 0.59 MCAODC_10050 gcvP aminomethyl-transferring glycine dehydrogenase 0.66 MCAODC_04735 trkH Trk system potassium transporter TrkH — —
Escherichia fergusonii Becca 0.59 EFB2_00999 Glycine dehydrogenase (decarboxylating) 0.66 EFB2_04768 Trk system potassium uptake protein TrkH low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF3003 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.66 GFF276 Potassium uptake protein TrkH low > 78
Escherichia coli BL21 0.59 ECD_02735 glycine decarboxylase, PLP-dependent, subunit P of glycine cleavage complex 0.65 ECD_03740 potassium transporter low > 61
Escherichia coli ECRC62 0.59 BNILDI_09980 gcvP aminomethyl-transferring glycine dehydrogenase 0.66 BNILDI_05170 trkH Trk system potassium transporter TrkH low > 75
Shewanella loihica PV-4 0.59 Shew_3062 glycine dehydrogenase (RefSeq) 0.71 Shew_0022 TrkH family potassium uptake protein (RefSeq) low > 60
Erwinia amylovora T8 0.59 OLJFJH_08785 aminomethyl-transferring glycine dehydrogenase 0.64 OLJFJH_06570 Trk system potassium transporter TrkH low > 58
Shewanella sp. ANA-3 0.58 Shewana3_3499 glycine dehydrogenase (RefSeq) 0.68 Shewana3_0027 TrkH family potassium uptake protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.58 SO0781 gcvP glycine cleavage system P protein (NCBI ptt file) 0.67 SO0024 trkH-1 potassium uptake protein TrkH (NCBI ptt file) low > 76
Dickeya dadantii 3937 0.58 DDA3937_RS03255 aminomethyl-transferring glycine dehydrogenase 0.67 DDA3937_RS20235 Trk system potassium transporter TrkH low > 74
Dickeya dianthicola ME23 0.58 DZA65_RS03445 aminomethyl-transferring glycine dehydrogenase 0.68 DZA65_RS01050 Trk system potassium transporter TrkH low > 75
Serratia liquefaciens MT49 0.58 IAI46_20850 aminomethyl-transferring glycine dehydrogenase 0.66 IAI46_01150 Trk system potassium transporter TrkH low > 86
Dickeya dianthicola 67-19 0.58 HGI48_RS03400 aminomethyl-transferring glycine dehydrogenase 0.67 HGI48_RS00990 Trk system potassium transporter TrkH low > 71
Shewanella amazonensis SB2B 0.58 Sama_2719 glycine dehydrogenase (RefSeq) 0.71 Sama_0035 TrkH family potassium uptake protein (RefSeq) low > 62
Pectobacterium carotovorum WPP14 0.58 HER17_RS17995 aminomethyl-transferring glycine dehydrogenase 0.67 HER17_RS20535 Trk system potassium transporter TrkH low > 75
Rahnella sp. WP5 0.58 EX31_RS21520 aminomethyl-transferring glycine dehydrogenase 0.64 EX31_RS14550 Trk system potassium transporter TrkH low > 89
Erwinia tracheiphila SCR3 0.58 LU632_RS05915 gcvP aminomethyl-transferring glycine dehydrogenase 0.65 LU632_RS23935 trkH Trk system potassium transporter TrkH low > 74
Erwinia tracheiphila HP pepo 2.2 0.58 IJEDHG_03250 gcvP aminomethyl-transferring glycine dehydrogenase 0.65 IJEDHG_08570 trkH Trk system potassium transporter TrkH low > 61
Echinicola vietnamensis KMM 6221, DSM 17526 0.55 Echvi_0744 glycine dehydrogenase (decarboxylating) 0.36 Echvi_3017 Trk-type K+ transport systems, membrane components low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF5215 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.36 GFF1719 Potassium uptake protein TrkH low > 90
Acidovorax sp. GW101-3H11 0.54 Ac3H11_167 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.40 Ac3H11_706 Potassium uptake protein TrkH low > 79
Cellulophaga baltica 18 0.50 M666_RS01560 aminomethyl-transferring glycine dehydrogenase 0.36 M666_RS08595 potassium transporter TrkG — —

Not shown: 58 genomes with orthologs for CSW01_15330 only; 1 genomes with orthologs for CSW01_13960 only