Conservation of cofitness between CSW01_03430 and CSW01_12370 in Vibrio cholerae E7946 ATCC 55056

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03430 U32 family peptidase 1.0 CSW01_12370 SH3 domain-containing protein 0.45 11
Rahnella sp. WP5 0.68 EX31_RS08485 U32 family peptidase 0.27 EX31_RS08155 SH3 domain-containing protein low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF1509 FIG139928: Putative protease 0.22 GFF3169 SH3 domain protein low > 78
Dickeya dadantii 3937 0.67 DDA3937_RS03110 U32 family peptidase 0.24 DDA3937_RS17115 SH3 domain-containing protein low > 74
Escherichia coli ECOR38 0.67 HEPCGN_17045 rlhA U32 family peptidase 0.24 HEPCGN_17575 ygiM TIGR04211 family SH3 domain-containing protein low > 88
Escherichia coli Nissle 1917 0.67 ECOLIN_RS18145 U32 family peptidase 0.24 ECOLIN_RS17645 TIGR04211 family SH3 domain-containing protein low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_00541 hypothetical protein 0.24 OHPLBJKB_00649 hypothetical protein low > 74
Escherichia fergusonii Becca 0.67 EFB2_00664 hypothetical protein 0.24 EFB2_00756 hypothetical protein low > 86
Dickeya dianthicola 67-19 0.67 HGI48_RS03285 U32 family peptidase 0.24 HGI48_RS17165 SH3 domain-containing protein low > 71
Escherichia coli BW25113 0.67 b3159 yhbV orf, hypothetical protein (VIMSS) 0.24 b3055 htrG predicted signal transduction protein (SH3 domain) (NCBI) low > 76
Escherichia coli ECRC101 0.67 MCAODC_08690 rlhA U32 family peptidase 0.24 MCAODC_09235 ygiM TIGR04211 family SH3 domain-containing protein low > 87
Escherichia coli ECRC100 0.67 OKFHMN_18170 rlhA U32 family peptidase 0.24 OKFHMN_18720 ygiM TIGR04211 family SH3 domain-containing protein low > 79
Escherichia coli ECRC102 0.67 NIAGMN_15930 rlhA U32 family peptidase 0.24 NIAGMN_16485 ygiM TIGR04211 family SH3 domain-containing protein low > 80
Escherichia coli ECRC99 0.67 KEDOAH_09980 rlhA U32 family peptidase 0.24 KEDOAH_09425 ygiM TIGR04211 family SH3 domain-containing protein — —
Escherichia coli BL21 0.67 ECD_03026 U32 peptidase family protein 0.24 ECD_02925 SH3 domain protein low > 61
Escherichia coli ECRC62 0.67 BNILDI_01560 rlhA U32 family peptidase 0.24 BNILDI_01010 ygiM TIGR04211 family SH3 domain-containing protein low > 75
Escherichia coli ECRC98 0.67 JDDGAC_21795 rlhA U32 family peptidase 0.24 JDDGAC_22355 ygiM TIGR04211 family SH3 domain-containing protein low > 87
Escherichia coli ECOR27 0.66 NOLOHH_09970 rlhA U32 family peptidase 0.24 NOLOHH_10505 ygiM TIGR04211 family SH3 domain-containing protein low > 76
Serratia liquefaciens MT49 0.66 IAI46_02010 U32 family peptidase 0.31 IAI46_22070 SH3 domain-containing protein low > 87
Dickeya dianthicola ME23 0.66 DZA65_RS03280 U32 family peptidase 0.24 DZA65_RS18250 SH3 domain-containing protein low > 75
Klebsiella pneumoniae MKP103 0.66 KDGMDA_05845 U32 family peptidase 0.25 KDGMDA_05280 TIGR04211 family SH3 domain-containing protein low > 95
Enterobacter asburiae PDN3 0.65 EX28DRAFT_3208 Collagenase and related proteases 0.24 EX28DRAFT_3083 SH3 domain protein low > 76
Klebsiella michiganensis M5al 0.65 BWI76_RS24975 U32 family peptidase 0.25 BWI76_RS24470 hypothetical protein low > 92
Pectobacterium carotovorum WPP14 0.65 HER17_RS18165 U32 family peptidase 0.31 HER17_RS04025 SH3 domain-containing protein low > 75
Enterobacter sp. TBS_079 0.64 MPMX20_04063 hypothetical protein 0.24 MPMX20_03892 hypothetical protein low > 85
Pantoea sp. MT58 0.63 IAI47_16970 U32 family peptidase 0.21 IAI47_03090 SH3 domain-containing protein low > 76
Pantoea agglomerans CFBP13505 P0401 0.63 PagCFBP13505_RS09065 U32 family peptidase 0.21 PagCFBP13505_RS11910 SH3 domain-containing protein low > 74
Erwinia tracheiphila HP pepo 2.2 0.60 IJEDHG_14000 U32 family peptidase 0.27 IJEDHG_14375 TIGR04211 family SH3 domain-containing protein low > 61
Erwinia tracheiphila SCR3 0.60 LU632_RS21010 U32 family peptidase 0.27 LU632_RS20685 SH3 domain-containing protein low > 73
Pseudomonas sp. SVBP6 0.47 COO64_RS14195 U32 family peptidase 0.21 COO64_RS07805 TIGR04211 family SH3 domain-containing protein low > 93
Shewanella loihica PV-4 0.46 Shew_2788 peptidase U32 (RefSeq) 0.26 Shew_0616 SH3 domain-containing protein (RefSeq) low > 60
Shewanella oneidensis MR-1 0.44 SO1248 hypothetical peptidase (NCBI ptt file) 0.23 SO3772 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.44 Shewana3_1064 peptidase U32 (RefSeq) 0.22 Shewana3_0820 SH3 type 3 domain-containing protein (RefSeq) low > 73
Pseudomonas aeruginosa PA14 0.44 IKLFDK_20170 U32 family peptidase 0.27 IKLFDK_21390 TIGR04211 family SH3 domain-containing protein low > 98
Pseudomonas stutzeri RCH2 0.44 Psest_0836 Collagenase and related proteases 0.29 Psest_2427 SH3 domain protein low > 67
Pseudomonas aeruginosa MRSN321 0.44 DY961_RS13310 U32 family peptidase 0.27 DY961_RS28255 TIGR04211 family SH3 domain-containing protein low > 100
Pseudomonas aeruginosa PUPa3 0.43 DQ20_RS48615 U32 family peptidase 0.27 DQ20_RS49100 TIGR04211 family SH3 domain-containing protein low > 101
Shewanella amazonensis SB2B 0.41 Sama_0997 peptidase U32 (RefSeq) 0.22 Sama_2675 SH3 domain-containing protein (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_2374 Collagenase and related proteases 0.18 B158DRAFT_0841 SH3 domain protein low > 40

Not shown: 18 genomes with orthologs for CSW01_03430 only; 6 genomes with orthologs for CSW01_12370 only