Conservation of cofitness between CSW01_00205 and CSW01_12015 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00205 hemolysin III family protein 1.0 CSW01_12015 TIGR01212 family radical SAM protein 0.54 8
Enterobacter asburiae PDN3 0.76 EX28DRAFT_2950 channel protein, hemolysin III family 0.68 EX28DRAFT_3274 radical SAM protein, TIGR01212 family low > 76
Enterobacter sp. TBS_079 0.76 MPMX20_03758 hypothetical protein 0.68 MPMX20_04125 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.76 BWI76_RS23840 hemolysin III family protein 0.68 BWI76_RS25305 TIGR01212 family radical SAM protein low > 92
Klebsiella pneumoniae MKP103 0.76 KDGMDA_04325 hemolysin III family protein 0.65 KDGMDA_06140 TIGR01212 family radical SAM protein low > 95
Dickeya dadantii 3937 0.74 DDA3937_RS03270 hemolysin III family protein 0.72 DDA3937_RS01670 TIGR01212 family radical SAM protein low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF2997 COG1272: Predicted membrane protein hemolysin III homolog 0.68 GFF2955 COG1242: Predicted Fe-S oxidoreductase low > 78
Escherichia coli ECRC98 0.73 JDDGAC_23185 yqfA hemolysin III family protein 0.68 JDDGAC_21515 yhcC TIGR01212 family radical SAM protein low > 87
Escherichia coli ECOR27 0.73 NOLOHH_11465 yqfA hemolysin III family protein 0.68 NOLOHH_09690 yhcC TIGR01212 family radical SAM protein low > 76
Escherichia coli ECRC101 0.73 MCAODC_10065 yqfA hemolysin III family protein 0.68 MCAODC_08410 yhcC TIGR01212 family radical SAM protein 0.37 9
Escherichia coli ECRC62 0.73 BNILDI_10000 yqfA hemolysin III family protein 0.68 BNILDI_01845 yhcC TIGR01212 family radical SAM protein low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_00816 hypothetical protein 0.68 OHPLBJKB_00489 hypothetical protein low > 74
Escherichia coli BL21 0.73 ECD_02731 hemolysin III family HylIII inner membrane protein 0.68 ECD_03076 putative Fe-S oxidoreductase, Radical SAM superfamily protein low > 61
Escherichia fergusonii Becca 0.73 EFB2_01002 hypothetical protein 0.68 EFB2_00612 hypothetical protein low > 86
Escherichia coli ECRC102 0.73 NIAGMN_17310 yqfA hemolysin III family protein 0.68 NIAGMN_15650 yhcC TIGR01212 family radical SAM protein low > 80
Escherichia coli ECOR38 0.73 HEPCGN_18835 yqfA hemolysin III family protein 0.68 HEPCGN_16765 yhcC TIGR01212 family radical SAM protein low > 88
Escherichia coli BW25113 0.73 b2899 yqfA predicted oxidoreductase, inner membrane subunit (NCBI) 0.68 b3211 yhcC predicted Fe-S oxidoreductase (NCBI) low > 76
Escherichia coli ECRC100 0.73 OKFHMN_19545 yqfA hemolysin III family protein 0.68 OKFHMN_17890 yhcC TIGR01212 family radical SAM protein low > 79
Escherichia coli ECRC99 0.73 KEDOAH_08595 yqfA hemolysin III family protein 0.68 KEDOAH_10260 yhcC TIGR01212 family radical SAM protein — —
Escherichia coli Nissle 1917 0.73 ECOLIN_RS16150 hemolysin III family protein 0.68 ECOLIN_RS18470 TIGR01212 family radical SAM protein low > 55
Serratia liquefaciens MT49 0.72 IAI46_20775 hemolysin III family protein 0.69 IAI46_22340 TIGR01212 family radical SAM protein low > 87
Dickeya dianthicola 67-19 0.68 HGI48_RS03410 hemolysin III family protein 0.72 HGI48_RS01565 TIGR01212 family radical SAM protein low > 71
Dickeya dianthicola ME23 0.67 DZA65_RS03455 hemolysin III family protein 0.72 DZA65_RS01640 TIGR01212 family radical SAM protein low > 75
Pectobacterium carotovorum WPP14 0.64 HER17_RS17935 hemolysin III family protein 0.71 HER17_RS19905 TIGR01212 family radical SAM protein low > 75
Shewanella loihica PV-4 0.48 Shew_2098 hemolysin III family channel protein (RefSeq) 0.54 Shew_1033 putative radical SAM protein (RefSeq) low > 60
Shewanella oneidensis MR-1 0.48 SO2447 channel protein, hemolysin III family subfamily (NCBI ptt file) 0.56 SO1326 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.46 Shewana3_1934 hemolysin III family channel protein (RefSeq) 0.57 Shewana3_3048 putative radical SAM protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.44 Sama_1862 hemolysin III family channel protein (RefSeq) 0.54 Sama_0858 hypothetical protein (RefSeq) low > 62
Parabacteroides merdae CL09T00C40 0.34 HMPREF1078_RS01905 hemolysin III family protein 0.31 HMPREF1078_RS16795 TIGR01212 family radical SAM protein low > 61
Desulfovibrio vulgaris Hildenborough JW710 0.30 DVU3295 hemolysin III (TIGR) 0.31 DVU0790 radical SAM protein, TIGR01212 family (TIGR) low > 55
Bacteroides ovatus ATCC 8483 0.28 BACOVA_00687 hypothetical protein 0.29 BACOVA_04934 radical SAM protein, TIGR01212 family low > 96
Bacteroides thetaiotaomicron VPI-5482 0.27 BT1983 hemolysin III (NCBI ptt file) 0.28 BT4125 conserved hypothetical protein (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.24 HMPREF1058_RS00565 hemolysin III family protein 0.31 HMPREF1058_RS14495 TIGR01212 family radical SAM protein low > 67
Fusobacterium nucleatum SB010 0.24 HUW76_01725 hemolysin III family protein 0.34 HUW76_06060 TIGR01212 family radical SAM protein low > 35
Bacteroides stercoris CC31F 0.24 HMPREF1181_RS16820 hemolysin III family protein 0.29 HMPREF1181_RS08775 TIGR01212 family radical SAM protein low > 56
Phocaeicola dorei CL03T12C01 0.24 ABI39_RS08185 hemolysin III family protein 0.30 ABI39_RS10115 TIGR01212 family radical SAM protein low > 72
Pedobacter sp. GW460-11-11-14-LB5 0.21 CA265_RS22915 hypothetical protein 0.30 CA265_RS14980 TIGR01212 family radical SAM protein low > 88

Not shown: 57 genomes with orthologs for CSW01_00205 only; 3 genomes with orthologs for CSW01_12015 only