Conservation of cofitness between CSW01_04975 and CSW01_10360 in Vibrio cholerae E7946 ATCC 55056

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04975 transcriptional regulator 1.0 CSW01_10360 peptidase M16 0.50 11
Erwinia amylovora T8 0.56 OLJFJH_17700 Cu(I)-responsive transcriptional regulator 0.17 OLJFJH_09095 pitrilysin low > 58
Enterobacter sp. TBS_079 0.56 MPMX20_01085 HTH-type transcriptional regulator CueR 0.17 MPMX20_03684 Protease 3 low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF4405 HTH-type transcriptional regulator cueR 0.18 GFF1302 Protease III precursor (EC 3.4.24.55) low > 78
Enterobacter asburiae PDN3 0.55 EX28DRAFT_2473 Cu(I)-responsive transcriptional regulator 0.17 EX28DRAFT_2896 Secreted/periplasmic Zn-dependent peptidases, insulinase-like low > 76
Klebsiella michiganensis M5al 0.54 BWI76_RS06910 transcriptional regulator 0.17 BWI76_RS23235 pitrilysin low > 92
Escherichia coli ECRC101 0.54 MCAODC_27250 cueR Cu(I)-responsive transcriptional regulator 0.17 MCAODC_10570 ptrA pitrilysin low > 87
Escherichia coli ECRC102 0.54 NIAGMN_06085 cueR Cu(I)-responsive transcriptional regulator 0.17 NIAGMN_17815 ptrA pitrilysin low > 80
Escherichia coli ECOR38 0.54 HEPCGN_06670 cueR Cu(I)-responsive transcriptional regulator 0.17 HEPCGN_19300 ptrA pitrilysin low > 88
Escherichia coli ECRC99 0.54 KEDOAH_19935 cueR Cu(I)-responsive transcriptional regulator 0.17 KEDOAH_08085 ptrA pitrilysin — —
Escherichia coli ECRC100 0.54 OKFHMN_08035 cueR Cu(I)-responsive transcriptional regulator 0.17 OKFHMN_20045 ptrA pitrilysin low > 79
Escherichia coli ECRC98 0.54 JDDGAC_11680 cueR Cu(I)-responsive transcriptional regulator 0.17 JDDGAC_23710 ptrA pitrilysin low > 87
Escherichia coli BW25113 0.54 b0487 cueR DNA-binding transcriptional activator of copper-responsive regulon genes (NCBI) 0.17 b2821 ptr protease III (NCBI) low > 76
Escherichia coli ECOR27 0.54 NOLOHH_01000 cueR Cu(I)-responsive transcriptional regulator 0.17 NOLOHH_11930 ptrA pitrilysin low > 76
Rahnella sp. WP5 0.54 EX31_RS22580 Cu(I)-responsive transcriptional regulator 0.17 EX31_RS13165 pitrilysin low > 89
Escherichia coli BL21 0.54 ECD_00438 copper-responsive regulon transcriptional regulator 0.17 ECD_02669 protease III low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_03187 HTH-type transcriptional regulator CueR 0.17 OHPLBJKB_00909 Protease 3 low > 74
Escherichia coli ECRC62 0.54 BNILDI_22420 cueR Cu(I)-responsive transcriptional regulator 0.17 BNILDI_10410 ptrA pitrilysin low > 75
Escherichia coli Nissle 1917 0.53 ECOLIN_RS02880 Cu(I)-responsive transcriptional regulator 0.17 ECOLIN_RS15835 pitrilysin — —
Escherichia fergusonii Becca 0.53 EFB2_03572 HTH-type transcriptional regulator CueR 0.17 EFB2_01063 Protease 3 low > 86
Klebsiella pneumoniae MKP103 0.53 KDGMDA_14950 Cu(I)-responsive transcriptional regulator 0.16 KDGMDA_03815 pitrilysin low > 95
Pantoea sp. MT58 0.51 IAI47_14395 Cu(I)-responsive transcriptional regulator 0.17 IAI47_03960 pitrilysin low > 76
Serratia liquefaciens MT49 0.51 IAI46_05315 Cu(I)-responsive transcriptional regulator 0.19 IAI46_20410 pitrilysin low > 87
Dickeya dianthicola 67-19 0.50 HGI48_RS05895 Cu(I)-responsive transcriptional regulator 0.19 HGI48_RS04995 pitrilysin low > 71
Pectobacterium carotovorum WPP14 0.50 HER17_RS15620 Cu(I)-responsive transcriptional regulator 0.20 HER17_RS16530 pitrilysin low > 75
Dickeya dadantii 3937 0.50 DDA3937_RS05850 Cu(I)-responsive transcriptional regulator 0.19 DDA3937_RS04985 pitrilysin low > 74
Dickeya dianthicola ME23 0.50 DZA65_RS06230 Cu(I)-responsive transcriptional regulator 0.19 DZA65_RS05335 pitrilysin low > 75
Pantoea agglomerans CFBP13505 P0401 0.50 PagCFBP13505_RS10805 Cu(I)-responsive transcriptional regulator 0.17 PagCFBP13505_RS17005 pitrilysin low > 74
Erwinia tracheiphila SCR3 0.47 LU632_RS15290 cueR Cu(I)-responsive transcriptional regulator 0.18 LU632_RS06185 ptrA pitrilysin low > 73
Erwinia tracheiphila HP pepo 2.2 0.47 IJEDHG_01065 cueR Cu(I)-responsive transcriptional regulator 0.18 IJEDHG_17200 ptrA pitrilysin — —
Pseudomonas aeruginosa PUPa3 0.39 DQ20_RS52395 cueR;go_function=DNA-binding Cu(I)-responsive transcriptional regulator 0.06 DQ20_RS38370 pqqF;go_function=metalloendopeptidase pyrroloquinoline quinone biosynthesis protein PqqF low > 101
Pseudomonas aeruginosa MRSN321 0.39 DY961_RS09650 cueR;go_function=DNA-binding Cu(I)-responsive transcriptional regulator 0.06 DY961_RS28885 pqqF;go_function=metalloendopeptidase pyrroloquinoline quinone biosynthesis protein PqqF low > 100
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_08070 transcriptional regulator 0.08 AO356_14220 pyrroloquinoline quinone biosynthesis protein PqqF low > 104
Pseudomonas aeruginosa PA14 0.39 IKLFDK_29700 Cu(I)-responsive transcriptional regulator 0.06 IKLFDK_09635 pyrroloquinoline quinone biosynthesis protein PqqF low > 98
Shewanella amazonensis SB2B 0.32 Sama_1785 MerR family transcriptional regulator (RefSeq) 0.45 Sama_2163 M16 family peptidase (RefSeq) low > 62
Shewanella sp. ANA-3 0.32 Shewana3_2762 MerR family transcriptional regulator (RefSeq) 0.45 Shewana3_1465 peptidase M16 domain-containing protein (RefSeq) — —
Shewanella oneidensis MR-1 0.32 SO1687 transcriptional regulator, MerR family (NCBI ptt file) 0.45 SO3083 peptidase, M16 family (NCBI ptt file) low > 76
Marinobacter adhaerens HP15 0.31 HP15_89 transcriptional regulator, MerR family protein 0.26 HP15_1211 protease III precursor low > 73

Not shown: 40 genomes with orthologs for CSW01_04975 only; 2 genomes with orthologs for CSW01_10360 only