Conservation of cofitness between CSW01_01875 and CSW01_10270 in Vibrio cholerae E7946 ATCC 55056

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01875 hypothetical protein 1.0 CSW01_10270 cytochrome c-type biogenesis protein CcmE 0.83 19
Rahnella sp. WP5 0.66 EX31_RS04470 transcriptional regulator 0.58 EX31_RS19750 cytochrome c maturation protein CcmE low > 89
Serratia liquefaciens MT49 0.66 IAI46_23490 transcriptional regulator 0.57 IAI46_18090 cytochrome c maturation protein CcmE low > 87
Erwinia amylovora T8 0.66 OLJFJH_03930 Uncharacterized protein YheO 0.54 OLJFJH_11095 cytochrome c maturation protein CcmE low > 58
Pectobacterium carotovorum WPP14 0.65 HER17_RS02010 transcriptional regulator 0.53 HER17_RS09050 cytochrome c maturation protein CcmE low > 75
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13505_RS21525 transcriptional regulator 0.53 PagCFBP13505_RS00040 cytochrome c maturation protein CcmE low > 74
Pantoea sp. MT58 0.65 IAI47_02055 transcriptional regulator 0.48 IAI47_06085 cytochrome c maturation protein CcmE low > 76
Escherichia coli ECOR38 0.64 HEPCGN_16130 yheO Uncharacterized protein YheO 0.58 HEPCGN_22565 ccmE cytochrome c maturation protein CcmE low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF3726 YheO-like PAS domain 0.56 GFF4878 Cytochrome c-type biogenesis protein CcmE, heme chaperone — —
Escherichia coli BL21 0.64 ECD_03197 putative PAS domain-containing DNA-binding transcriptional regulator 0.58 ECD_02124 periplasmic heme chaperone low > 61
Escherichia coli ECRC62 0.64 BNILDI_02420 yheO Uncharacterized protein YheO 0.58 BNILDI_13795 ccmE cytochrome c maturation protein CcmE low > 75
Escherichia coli ECRC102 0.64 NIAGMN_15070 yheO Uncharacterized protein YheO 0.58 NIAGMN_21065 ccmE cytochrome c maturation protein CcmE low > 80
Escherichia coli ECRC99 0.64 KEDOAH_10840 yheO Uncharacterized protein YheO 0.58 KEDOAH_04885 ccmE cytochrome c maturation protein CcmE — —
Klebsiella pneumoniae MKP103 0.64 KDGMDA_06760 Uncharacterized protein YheO 0.51 KDGMDA_23850 cytochrome c maturation protein CcmE low > 95
Escherichia coli ECRC101 0.64 MCAODC_07830 yheO Uncharacterized protein YheO 0.58 MCAODC_14350 ccmE cytochrome c maturation protein CcmE low > 87
Escherichia coli ECRC100 0.64 OKFHMN_17300 yheO Uncharacterized protein YheO 0.58 OKFHMN_23300 ccmE cytochrome c maturation protein CcmE low > 79
Escherichia coli ECRC98 0.64 JDDGAC_20930 yheO Uncharacterized protein YheO 0.58 JDDGAC_27260 ccmE cytochrome c maturation protein CcmE low > 87
Escherichia coli ECOR27 0.64 NOLOHH_09100 yheO Uncharacterized protein YheO 0.58 NOLOHH_14875 ccmE cytochrome c maturation protein CcmE low > 76
Escherichia coli Nissle 1917 0.64 ECOLIN_RS19165 transcriptional regulator 0.58 ECOLIN_RS12840 cytochrome c maturation protein CcmE — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_00357 Transcriptional regulator DauR 0.58 OHPLBJKB_01514 Cytochrome c-type biogenesis protein CcmE low > 74
Escherichia coli BW25113 0.64 b3346 yheO orf, hypothetical protein (VIMSS) 0.58 b2197 ccmE periplasmic heme chaperone (NCBI) low > 76
Escherichia fergusonii Becca 0.64 EFB2_00477 Transcriptional regulator DauR 0.58 EFB2_01659 Cytochrome c-type biogenesis protein CcmE low > 86
Shewanella oneidensis MR-1 0.35 SO1402 conserved hypothetical protein (NCBI ptt file) 0.62 SO0259 ccmE cytochrome c biogenesis protein CcmE (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.35 Shewana3_2973 YheO domain-containing protein (RefSeq) 0.63 Shewana3_0227 cytochrome c-type biogenesis protein CcmE (RefSeq) low > 73
Rhizobium sp. OAE497 0.16 ABIE40_RS21180 PAS domain-containing protein 0.30 ABIE40_RS05680 cytochrome c maturation protein CcmE low > 107
Pseudomonas fluorescens FW300-N2E3 0.16 AO353_04640 hypothetical protein 0.46 AO353_18870 cytochrome C biogenesis protein CcmE — —
Pseudomonas putida KT2440 0.16 PP_2931 conserved protein of unknown function 0.40 PP_4323 Cytochrome c-type biogenesis protein CcmE — —
Pseudomonas fluorescens GW456-L13 0.16 PfGW456L13_1693 YheO-like PAS domain 0.46 PfGW456L13_4312 Cytochrome c-type biogenesis protein CcmE, heme chaperone — —
Pseudomonas fluorescens FW300-N1B4 0.15 Pf1N1B4_923 YheO-like PAS domain 0.46 Pf1N1B4_3643 Cytochrome c-type biogenesis protein CcmE, heme chaperone — —
Pseudomonas fluorescens SBW25 0.15 PFLU_RS13585 DNA-binding protein 0.46 PFLU_RS08665 cytochrome c maturation protein CcmE low > 109
Pseudomonas fluorescens SBW25-INTG 0.15 PFLU_RS13585 DNA-binding protein 0.46 PFLU_RS08665 cytochrome c maturation protein CcmE low > 109
Pseudomonas aeruginosa PA14 0.15 IKLFDK_19905 Transcriptional regulator DauR 0.45 IKLFDK_07035 cytochrome c maturation protein CcmE — —
Pseudomonas sp. SVBP6 0.15 COO64_RS25095 transcriptional regulator 0.45 COO64_RS25710 ccmE cytochrome c maturation protein CcmE — —
Pseudomonas simiae WCS417 0.15 PS417_12915 DNA-binding protein 0.46 PS417_08710 cytochrome C biogenesis protein CcmE — —
Pseudomonas aeruginosa MRSN321 0.15 DY961_RS13545 dauR;inference=COORDINATES transcriptional regulator DauR 0.45 DY961_RS05515 ccmE;go_function=heme cytochrome c maturation protein CcmE — —
Pseudomonas aeruginosa PUPa3 0.15 DQ20_RS48840 dauR;inference=COORDINATES transcriptional regulator DauR 0.45 DQ20_RS47275 ccmE;go_function=heme cytochrome c maturation protein CcmE — —
Pseudomonas sp. DMC3 0.15 GFF1929 Transcriptional regulator DauR 0.44 GFF2489 Cytochrome c-type biogenesis protein CcmE — —
Pseudomonas fluorescens FW300-N2E2 0.14 Pf6N2E2_5396 YheO-like PAS domain 0.46 Pf6N2E2_2556 Cytochrome c-type biogenesis protein CcmE, heme chaperone — —
Pseudomonas sp. S08-1 0.14 OH686_07030 YheO-like PAS domain 0.47 OH686_02640 Cytochrome c-type biogenesis protein CcmE, heme chaperone — —
Pseudomonas fluorescens FW300-N2C3 0.14 AO356_17355 hypothetical protein 0.47 AO356_03640 cytochrome C biogenesis protein CcmE — —
Pseudomonas sp. RS175 0.13 PFR28_03547 Transcriptional regulator DauR 0.47 PFR28_00869 Cytochrome c-type biogenesis protein CcmE — —
Sinorhizobium meliloti 1021 0.13 SMc04327 hypothetical protein 0.33 SMc02362 cytochrome c-type biogenesis protein CcmE low > 103

Not shown: 25 genomes with orthologs for CSW01_01875 only; 33 genomes with orthologs for CSW01_10270 only