Conservation of cofitness between CSW01_02580 and CSW01_07995 in Vibrio cholerae E7946 ATCC 55056

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02580 DeoR/GlpR transcriptional regulator 1.0 CSW01_07995 galactose-1-epimerase 0.53 9
Shewanella oneidensis MR-1 0.71 SO4742 transcriptional regulator, DeoR family (NCBI ptt file) 0.28 SO0693 galM aldose 1-epimerase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.71 Shewana3_4126 DeoR family transcriptional regulator (RefSeq) 0.28 Shewana3_3579 Aldose 1-epimerase (EC 5.1.3.3) (from data) low > 73
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_4216 Transcriptional regulator of glmS gene, DeoR family 0.30 Pf6N2E2_2135 Aldose 1-epimerase (EC 5.1.3.3) low > 103
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_11735 XRE family transcriptional regulator 0.30 AO356_01315 aldose epimerase low > 104
Shewanella amazonensis SB2B 0.67 Sama_3640 DeoR family transcriptional regulator (RefSeq) 0.27 Sama_0535 Aldose 1-epimerase (EC 5.1.3.3) (from data) low > 62
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_1946 Transcriptional regulator of glmS gene, DeoR family 0.30 Pf1N1B4_84 Aldose 1-epimerase (EC 5.1.3.3) low > 87
Pseudomonas sp. RS175 0.67 PFR28_04573 Glucitol operon repressor 0.32 PFR28_01305 Aldose 1-epimerase low > 88
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS30105 DeoR family transcriptional regulator 0.30 PFLU_RS11665 galactose mutarotase low > 109
Pseudomonas sp. DMC3 0.67 GFF555 Glucitol operon repressor 0.30 GFF1407 Aldose 1-epimerase low > 89
Pseudomonas fluorescens SBW25 0.67 PFLU_RS30105 DeoR family transcriptional regulator 0.30 PFLU_RS11665 galactose mutarotase low > 109
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_5118 transcriptional regulator, DeoR family 0.30 Psyr_2369 aldose 1-epimerase low > 86
Pseudomonas simiae WCS417 0.67 PS417_28450 XRE family transcriptional regulator 0.30 PS417_11040 aldose epimerase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_5118 transcriptional regulator, DeoR family 0.30 Psyr_2369 aldose 1-epimerase low > 86
Pseudomonas lactucae CFBP13502 0.67 GEMAOFIL_00160 Glucitol operon repressor 0.30 GEMAOFIL_02513 Aldose 1-epimerase low > 96
Alteromonas macleodii MIT1002 0.45 MIT1002_03897 Glucitol operon repressor 0.28 MIT1002_00187 Aldose 1-epimerase precursor low > 70
Klebsiella pneumoniae MRSN742743 0.40 GJGHJB_01071 glpR DNA-binding transcriptional repressor 0.47 GJGHJB_03486 galM galactose-1-epimerase low > 83
Klebsiella pneumoniae MKP103 0.40 KDGMDA_02910 DNA-binding transcriptional repressor 0.47 KDGMDA_16870 galactose-1-epimerase low > 94
Klebsiella michiganensis M5al 0.39 BWI76_RS22240 transcriptional regulator 0.49 BWI76_RS08610 galactose-1-epimerase low > 92
Enterobacter asburiae PDN3 0.39 EX28DRAFT_2796 transcriptional regulator, DeoR family 0.47 EX28DRAFT_2239 galactose mutarotase low > 76
Enterobacter sp. TBS_079 0.39 MPMX20_03591 Glucitol operon repressor 0.48 MPMX20_01383 Aldose 1-epimerase low > 85
Escherichia coli ECRC98 0.38 JDDGAC_24325 srlR glucitol operon DNA-binding transcriptional repressor SrlR 0.48 JDDGAC_10385 galM galactose-1-epimerase low > 87
Escherichia coli ECRC100 0.38 OKFHMN_20660 srlR glucitol operon DNA-binding transcriptional repressor SrlR 0.48 OKFHMN_06730 galM galactose-1-epimerase low > 79
Escherichia coli ECRC101 0.38 MCAODC_11185 srlR glucitol operon DNA-binding transcriptional repressor SrlR 0.48 MCAODC_25950 galM galactose-1-epimerase low > 87
Escherichia coli ECRC102 0.38 NIAGMN_18430 srlR glucitol operon DNA-binding transcriptional repressor SrlR 0.48 NIAGMN_04780 galM galactose-1-epimerase low > 80
Escherichia coli ECRC99 0.38 KEDOAH_07475 srlR glucitol operon DNA-binding transcriptional repressor SrlR 0.48 KEDOAH_21235 galM galactose-1-epimerase — —
Escherichia coli ECRC62 0.38 BNILDI_11065 srlR glucitol operon DNA-binding transcriptional repressor SrlR 0.48 BNILDI_21155 galM galactose-1-epimerase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF4701 Glucitol operon repressor 0.48 GFF649 Aldose 1-epimerase (EC 5.1.3.3) low > 78
Escherichia coli ECOR38 0.38 HEPCGN_19860 srlR glucitol operon DNA-binding transcriptional repressor SrlR 0.48 HEPCGN_01545 galM galactose-1-epimerase low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.38 OHPLBJKB_01027 Glucitol operon repressor 0.48 OHPLBJKB_02957 Aldose 1-epimerase low > 74
Escherichia coli BW25113 0.38 b2707 srlR DNA-bindng transcriptional repressor (NCBI) 0.48 b0756 galM galactose-1-epimerase (mutarotase) (NCBI) low > 76
Escherichia fergusonii Becca 0.38 EFB2_01217 Glucitol operon repressor 0.48 EFB2_03350 Aldose 1-epimerase low > 86
Escherichia coli ECOR27 0.38 NOLOHH_12505 srlR glucitol operon DNA-binding transcriptional repressor SrlR 0.48 NOLOHH_23160 galM galactose-1-epimerase low > 75
Escherichia coli Nissle 1917 0.38 ECOLIN_RS15100 glucitol operon DNA-binding transcriptional repressor SrlR 0.48 ECOLIN_RS04025 galactose-1-epimerase low > 55
Rahnella sp. WP5 0.38 EX31_RS03335 DNA-binding transcriptional repressor 0.47 EX31_RS23565 galactose-1-epimerase low > 89
Serratia liquefaciens MT49 0.37 IAI46_19080 DNA-binding transcriptional repressor 0.49 IAI46_06420 galactose-1-epimerase low > 87
Erwinia amylovora T8 0.35 OLJFJH_02080 DNA-binding transcriptional repressor 0.44 OLJFJH_16830 galactose-1-epimerase low > 58
Pontibacter actiniarum KMM 6156, DSM 19842 0.25 CA264_11305 transcriptional regulator 0.35 CA264_09120 galactose-1-epimerase low > 74

Not shown: 15 genomes with orthologs for CSW01_02580 only; 37 genomes with orthologs for CSW01_07995 only