Conservation of cofitness between CSW01_03400 and CSW01_07850 in Vibrio cholerae E7946 ATCC 55056

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03400 tRNA pseudouridine(55) synthase TruB 1.0 CSW01_07850 efflux RND transporter periplasmic adaptor subunit 0.48 17
Serratia liquefaciens MT49 0.72 IAI46_01945 tRNA pseudouridine(55) synthase TruB 0.10 IAI46_18480 efflux RND transporter periplasmic adaptor subunit low > 86
Klebsiella michiganensis M5al 0.68 BWI76_RS25080 tRNA pseudouridine(55) synthase 0.11 BWI76_RS22535 membrane fusion protein of a type I secretion system low > 92
Shewanella sp. ANA-3 0.64 Shewana3_1032 tRNA pseudouridine synthase B (RefSeq) 0.10 Shewana3_3456 RND family efflux transporter MFP subunit (RefSeq) 0.34 61
Alteromonas macleodii MIT1002 0.50 MIT1002_01773 tRNA pseudouridine synthase B 0.10 MIT1002_00481 Macrolide-specific efflux protein MacA precursor low > 70
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_4178 tRNA pseudouridine synthase B 0.12 Psyr_1970 Secretion protein HlyD 0.24 60
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_4178 tRNA pseudouridine synthase B 0.12 Psyr_1970 Secretion protein HlyD low > 86
Pseudomonas putida KT2440 0.46 PP_4710 tRNA pseudouridine 55 synthase 0.10 PP_4209 ABC export system, membrane fusion protein low > 96
Pseudomonas sp. BP01 0.46 JOY50_RS26845 truB tRNA pseudouridine(55) synthase TruB 0.12 JOY50_RS18965 efflux RND transporter periplasmic adaptor subunit low > 84
Pseudomonas sp. DMC3 0.46 GFF4990 tRNA pseudouridine synthase B 0.12 GFF758 Macrolide export protein MacA low > 89
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_5086 tRNA pseudouridine synthase B (EC 4.2.1.70) 0.11 PfGW456L13_2393 pyoverdine-specific efflux macA-like protein low > 87
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_1159 tRNA pseudouridine synthase B (EC 4.2.1.70) 0.12 Pf1N1B4_134 pyoverdine-specific efflux macA-like protein low > 87
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_3351 tRNA pseudouridine synthase B (EC 4.2.1.70) 0.12 Pf6N2E2_20 pyoverdine-specific efflux macA-like protein low > 103
Pseudomonas sp. RS175 0.45 PFR28_00092 tRNA pseudouridine synthase B 0.13 PFR28_02868 Macrolide export protein MacA — —
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_07400 pseudouridine synthase 0.12 AO356_21170 hemolysin secretion protein D low > 104
Pseudomonas sp. SVBP6 0.44 COO64_RS15160 truB tRNA pseudouridine(55) synthase TruB 0.11 COO64_RS18800 efflux RND transporter periplasmic adaptor subunit low > 93
Pseudomonas fluorescens SBW25 0.44 PFLU_RS25800 tRNA pseudouridine(55) synthase TruB 0.11 PFLU_RS19425 efflux RND transporter periplasmic adaptor subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS25800 tRNA pseudouridine(55) synthase TruB 0.11 PFLU_RS19425 efflux RND transporter periplasmic adaptor subunit low > 109
Pseudomonas simiae WCS417 0.44 PS417_23960 pseudouridine synthase 0.11 PS417_17635 hemolysin secretion protein D — —
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS17985 tRNA pseudouridine synthase B 0.11 HSERO_RS17260 membrane protein low > 78
Pseudomonas aeruginosa PA14 0.43 IKLFDK_29890 tRNA pseudouridine(55) synthase TruB 0.11 IKLFDK_11710 pyoverdine export/recycling transporter periplasmic adaptor subunit PvdR low > 100
Xanthobacter sp. DMC5 0.36 GFF2293 tRNA pseudouridine synthase B 0.12 GFF2164 Macrolide export protein MacA — —
Variovorax sp. SCN45 0.36 GFF220 tRNA pseudouridine(55) synthase (EC 5.4.99.25) 0.11 GFF1292 Macrolide-specific efflux protein MacA low > 127
Rhodopseudomonas palustris CGA009 0.33 TX73_002255 tRNA pseudouridine(55) synthase TruB 0.09 TX73_008470 efflux RND transporter periplasmic adaptor subunit low > 86
Azospirillum sp. SherDot2 0.33 MPMX19_02524 tRNA pseudouridine synthase B 0.11 MPMX19_03089 Macrolide export protein MacA low > 112
Sinorhizobium meliloti 1021 0.28 SMc00321 tRNA pseudouridine synthase B 0.10 SMc04350 multidrug efflux system transmembrane protein low > 103
Fusobacterium nucleatum SB010 0.26 HUW76_06175 tRNA pseudouridine(55) synthase TruB 0.10 HUW76_07970 efflux RND transporter periplasmic adaptor subunit low > 35

Not shown: 71 genomes with orthologs for CSW01_03400 only; 10 genomes with orthologs for CSW01_07850 only