Conservation of cofitness between CSW01_07715 and CSW01_06820 in Vibrio cholerae E7946 ATCC 55056

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07715 lipoprotein NlpC 1.0 CSW01_06820 ribosomal RNA large subunit methyltransferase I 0.41 15
Shewanella oneidensis MR-1 0.42 SO0061 lipoprotein, NLP/P60 family (NCBI ptt file) 0.62 SO1149 hypothetical SAM-dependent methyltransferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.41 Shewana3_0063 NLP/P60 protein (RefSeq) 0.63 Shewana3_0977 SAM-dependent methyltransferase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.41 Sama_0069 NLP/P60 family lipoprotein (RefSeq) 0.63 Sama_2965 putative SAM-dependent methyltransferase (RefSeq) low > 62
Enterobacter asburiae PDN3 0.38 EX28DRAFT_1715 Cell wall-associated hydrolases (invasion-associated proteins) 0.66 EX28DRAFT_1976 Predicted SAM-dependent methyltransferases low > 76
Enterobacter sp. TBS_079 0.38 MPMX20_01905 Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase 0.66 MPMX20_01617 Ribosomal RNA large subunit methyltransferase I low > 85
Klebsiella michiganensis M5al 0.38 BWI76_RS17090 NLP/P60 protein 0.64 BWI76_RS10045 23S rRNA (cytosine(1962)-C(5))-methyltransferase — —
Erwinia amylovora T8 0.37 OLJFJH_14660 endopeptidase 0.64 OLJFJH_15885 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI low > 58
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF3532 Probable lipoprotein nlpC precursor 0.64 GFF3258 LSU m5C1962 methyltransferase RlmI — —
Pantoea sp. MT58 0.36 IAI47_10930 C40 family peptidase 0.64 IAI47_12595 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI low > 76
Phocaeicola vulgatus CL09T03C04 0.29 HMPREF1058_RS05845 C40 family peptidase 0.30 HMPREF1058_RS05890 class I SAM-dependent rRNA methyltransferase low > 67
Phocaeicola dorei CL03T12C01 0.29 ABI39_RS18260 C40 family peptidase 0.32 ABI39_RS18215 class I SAM-dependent rRNA methyltransferase low > 72
Pseudomonas stutzeri RCH2 0.25 Psest_3019 Cell wall-associated hydrolases (invasion-associated proteins) 0.28 Psest_0236 Predicted SAM-dependent methyltransferases low > 67
Pseudomonas sp. BP01 0.24 JOY50_RS23965 NlpC/P60 family protein 0.28 JOY50_RS20750 class I SAM-dependent rRNA methyltransferase low > 84
Rhodanobacter sp. FW510-T8 0.24 OKGIIK_09665 Hydrolase 0.25 OKGIIK_16710 rlmK RlmI/RlmK family 23S rRNA methyltransferase low > 52
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS22040 NlpC/P60 family protein 0.28 PFLU_RS28525 class I SAM-dependent rRNA methyltransferase low > 109
Pseudomonas fluorescens SBW25 0.24 PFLU_RS22040 NlpC/P60 family protein 0.28 PFLU_RS28525 class I SAM-dependent rRNA methyltransferase low > 109
Pseudomonas putida KT2440 0.23 PP_1670 putative Lipoprotein 0.28 PP_5127 ribosomal RNA large subunit methyltransferase I low > 96
Pseudomonas aeruginosa PA14 0.23 IKLFDK_05635 peptidase P60 0.28 IKLFDK_23665 RlmI/RlmK family 23S rRNA methyltransferase low > 101
Dyella japonica UNC79MFTsu3.2 0.22 ABZR86_RS08945 C40 family peptidase 0.28 ABZR86_RS16890 class I SAM-dependent rRNA methyltransferase low > 74
Pseudomonas sp. S08-1 0.20 OH686_05010 NLP/P60 family protein 0.28 OH686_14110 23S rRNA (cytosine(1962)-C(5))-methyltransferase low > 80

Not shown: 4 genomes with orthologs for CSW01_07715 only; 67 genomes with orthologs for CSW01_06820 only