Conservation of cofitness between CSW01_04870 and CSW01_05330 in Vibrio cholerae E7946 ATCC 55056

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04870 ribosome silencing factor 1.0 CSW01_05330 fatty acid oxidation complex subunit alpha FadJ 0.47 15
Dickeya dianthicola 67-19 0.71 HGI48_RS06225 ribosome silencing factor 0.51 HGI48_RS14550 fatty acid oxidation complex subunit alpha FadJ low > 71
Pectobacterium carotovorum WPP14 0.71 HER17_RS15235 ribosome silencing factor 0.55 HER17_RS06890 fatty acid oxidation complex subunit alpha FadJ low > 75
Pantoea sp. MT58 0.70 IAI47_14015 ribosome silencing factor 0.56 IAI47_06130 fatty acid oxidation complex subunit alpha FadJ low > 76
Dickeya dianthicola ME23 0.70 DZA65_RS06570 ribosome silencing factor 0.51 DZA65_RS15485 fatty acid oxidation complex subunit alpha FadJ low > 75
Pantoea agglomerans CFBP13505 P0401 0.70 PagCFBP13505_RS03290 ribosome silencing factor 0.55 PagCFBP13505_RS00085 fatty acid oxidation complex subunit alpha FadJ low > 74
Dickeya dadantii 3937 0.69 DDA3937_RS06180 ribosome silencing factor 0.51 DDA3937_RS14600 fatty acid oxidation complex subunit alpha FadJ low > 74
Enterobacter sp. TBS_079 0.67 MPMX20_01296 Ribosomal silencing factor RsfS 0.55 MPMX20_03268 Fatty acid oxidation complex subunit alpha low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_03069 Ribosomal silencing factor RsfS 0.56 OHPLBJKB_01365 Fatty acid oxidation complex subunit alpha low > 74
Escherichia coli Nissle 1917 0.67 ECOLIN_RS03470 ribosome silencing factor 0.54 ECOLIN_RS13550 fatty acid oxidation complex subunit alpha FadJ — —
Escherichia coli BW25113 0.67 b0637 ybeB orf, hypothetical protein (VIMSS) 0.54 b2341 yfcX fused enoyl-CoA hydratase and epimerase and isomerase/3-hydroxyacyl-CoA dehydrogenase (NCBI) — —
Escherichia fergusonii Becca 0.67 EFB2_03455 Ribosomal silencing factor RsfS 0.54 EFB2_01518 Fatty acid oxidation complex subunit alpha low > 86
Escherichia coli BL21 0.67 ECD_00606 ribosomal silencing factor 0.54 ECD_02265 enoyl-CoA hydratase/epimerase and isomerase/3-hydroxyacyl-CoA dehydrogenase low > 61
Escherichia coli ECRC62 0.67 BNILDI_21740 rsfS ribosome silencing factor 0.54 BNILDI_13110 fadJ fatty acid oxidation complex subunit alpha FadJ low > 75
Escherichia coli ECRC99 0.67 KEDOAH_20615 rsfS ribosome silencing factor 0.54 KEDOAH_05635 fadJ fatty acid oxidation complex subunit alpha FadJ — —
Escherichia coli ECRC100 0.67 OKFHMN_07355 rsfS ribosome silencing factor 0.54 OKFHMN_22560 fadJ fatty acid oxidation complex subunit alpha FadJ low > 79
Escherichia coli ECRC102 0.67 NIAGMN_05410 rsfS ribosome silencing factor 0.54 NIAGMN_20335 fadJ fatty acid oxidation complex subunit alpha FadJ low > 80
Escherichia coli ECRC101 0.67 MCAODC_26570 rsfS ribosome silencing factor 0.54 MCAODC_13590 fadJ fatty acid oxidation complex subunit alpha FadJ low > 87
Escherichia coli ECOR27 0.67 NOLOHH_23730 rsfS ribosome silencing factor 0.54 NOLOHH_14195 fadJ fatty acid oxidation complex subunit alpha FadJ low > 76
Escherichia coli ECOR38 0.67 HEPCGN_00920 rsfS ribosome silencing factor 0.54 HEPCGN_21755 fadJ fatty acid oxidation complex subunit alpha FadJ low > 88
Escherichia coli ECRC98 0.67 JDDGAC_11000 rsfS ribosome silencing factor 0.54 JDDGAC_26520 fadJ fatty acid oxidation complex subunit alpha FadJ low > 87
Erwinia amylovora T8 0.66 OLJFJH_17215 ribosome silencing factor 0.45 OLJFJH_11135 fatty acid oxidation complex subunit alpha FadJ low > 58
Rahnella sp. WP5 0.65 EX31_RS23130 ribosome silencing factor 0.56 EX31_RS19705 fatty acid oxidation complex subunit alpha FadJ low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF4550 Iojap protein 0.54 GFF1954 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) low > 78
Klebsiella pneumoniae MKP103 0.65 KDGMDA_16405 ribosome silencing factor 0.53 KDGMDA_27290 fatty acid oxidation complex subunit alpha FadJ low > 95
Serratia liquefaciens MT49 0.65 IAI46_05940 ribosome silencing factor 0.55 IAI46_18045 fatty acid oxidation complex subunit alpha FadJ — —
Klebsiella michiganensis M5al 0.65 BWI76_RS08045 ribosome silencing factor RsfS 0.53 BWI76_RS20455 multifunctional fatty acid oxidation complex subunit alpha — —
Shewanella oneidensis MR-1 0.62 SO1170 iojap domain protein (NCBI ptt file) 0.52 SO3088 fatty oxidation complex, alpha subunit (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.61 Shewana3_0997 iojap-like protein (RefSeq) 0.52 Shewana3_1461 fadJ multifunctional fatty acid oxidation complex subunit alpha (RefSeq) — —
Alteromonas macleodii MIT1002 0.59 MIT1002_01853 Ribosomal silencing factor RsfS 0.54 MIT1002_01287 Fatty acid oxidation complex subunit alpha low > 70
Shewanella amazonensis SB2B 0.58 Sama_2586 iojap domain-containing protein (RefSeq) 0.54 Sama_2167 fadJ multifunctional fatty acid oxidation complex subunit alpha (RefSeq) 0.28 25
Shewanella loihica PV-4 0.57 Shew_2933 iojap-like protein (RefSeq) 0.52 Shew_2425 fadJ multifunctional fatty acid oxidation complex subunit alpha (RefSeq) — —
Kangiella aquimarina DSM 16071 0.53 B158DRAFT_0086 iojap-like ribosome-associated protein 0.49 B158DRAFT_1008 fatty oxidation complex, alpha subunit FadJ low > 40
Rhodopseudomonas palustris CGA009 0.41 TX73_000865 ribosome silencing factor 0.28 TX73_004220 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 86
Dechlorosoma suillum PS 0.40 Dsui_0452 iojap-like ribosome-associated protein 0.25 Dsui_0323 3-hydroxyacyl-CoA dehydrogenase low > 51
Dinoroseobacter shibae DFL-12 0.38 Dshi_0087 iojap-like protein (RefSeq) 0.25 Dshi_0835 3-hydroxyacyl-CoA dehydrogenase NAD-binding (RefSeq) low > 64
Sphingobium sp. HT1-2 0.34 GFF750 Ribosomal silencing factor RsfA 0.27 GFF1580 Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) low > 95
Azospirillum sp. SherDot2 0.32 MPMX19_01941 Ribosomal silencing factor RsfS 0.22 MPMX19_05225 Fatty acid oxidation complex subunit alpha low > 112

Not shown: 17 genomes with orthologs for CSW01_04870 only; 25 genomes with orthologs for CSW01_05330 only