Conservation of cofitness between CSW01_01375 and CSW01_04620 in Vibrio cholerae E7946 ATCC 55056

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01375 IclR family transcriptional regulator 1.0 CSW01_04620 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.42 15
Variovorax sp. OAS795 0.64 ABID97_RS03230 uracil-DNA glycosylase family protein 0.45 ABID97_RS07920 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 91
Variovorax sp. SCN45 0.62 GFF3441 Hypothetical protein VC0266 (sugar utilization related?) 0.45 GFF6017 NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) low > 127
Paraburkholderia graminis OAS925 0.61 ABIE53_003949 uracil-DNA glycosylase 0.46 ABIE53_000759 7-cyano-7-deazaguanine reductase low > 113
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS27445 hypothetical protein 0.51 RR42_RS02310 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 128
Shewanella loihica PV-4 0.57 Shew_2359 uracil-DNA glycosylase superfamily protein (RefSeq) 0.58 Shew_2654 queF 7-cyano-7-deazaguanine reductase (RefSeq) low > 60
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS23300 IclR family transcriptional regulator 0.46 BPHYT_RS03135 NADPH-dependent 7-cyano-7-deazaguanine reductase — —
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS12170 uracil-DNA glycosylase family protein 0.49 LRK54_RS10510 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 59
Kangiella aquimarina DSM 16071 0.53 B158DRAFT_0448 Uracil-DNA glycosylase 0.52 B158DRAFT_2159 7-cyano-7-deazaguanine reductase low > 40
Rhodanobacter denitrificans MT42 0.53 LRK55_RS11905 uracil-DNA glycosylase family protein 0.49 LRK55_RS10150 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 63
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_11755 Uracil-DNA glycosylase 0.52 OKGIIK_13395 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 53
Rhodanobacter sp000427505 FW510-R12 0.52 LRK53_RS16320 uracil-DNA glycosylase family protein 0.52 LRK53_RS03330 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 59
Shewanella oneidensis MR-1 0.49 SO1775 phage SPO1 DNA polymerase domain protein (NCBI ptt file) 0.59 SO1608 conserved hypothetical protein (NCBI ptt file) low > 76
Ralstonia solanacearum PSI07 0.48 RPSI07_RS17480 IclR family transcriptional regulator 0.52 RPSI07_RS21815 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 81
Shewanella sp. ANA-3 0.48 Shewana3_2680 phage SPO1 DNA polymerase domain-containing protein (RefSeq) 0.59 Shewana3_2835 queF 7-cyano-7-deazaguanine reductase (RefSeq) low > 73
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS15885 IclR family transcriptional regulator 0.52 RALBFv3_RS11390 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 76
Shewanella amazonensis SB2B 0.48 Sama_1203 hypothetical protein (RefSeq) 0.56 Sama_1120 queF 7-cyano-7-deazaguanine reductase (RefSeq) low > 62
Ralstonia solanacearum UW163 0.48 UW163_RS13330 IclR family transcriptional regulator 0.52 UW163_RS02195 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Ralstonia solanacearum GMI1000 0.48 RS_RS06665 IclR family transcriptional regulator 0.52 RS_RS02220 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 80
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS11455 uracil-DNA glycosylase family protein 0.51 ABZR87_RS07355 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 80
Alteromonas macleodii MIT1002 0.46 MIT1002_03375 Uracil DNA glycosylase superfamily protein 0.55 MIT1002_00988 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 70

Not shown: 16 genomes with orthologs for CSW01_01375 only; 65 genomes with orthologs for CSW01_04620 only