Conservation of cofitness between CSW01_00690 and CSW01_03630 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00690 homoserine/homoserine lactone efflux protein 1.0 CSW01_03630 sensor histidine kinase 0.56 18
Dickeya dianthicola ME23 0.55 DZA65_RS21035 homoserine/homoserine lactone efflux protein 0.57 DZA65_RS20935 sensor histidine kinase low > 75
Erwinia tracheiphila SCR3 0.54 LU632_RS24085 rhtB homoserine/homoserine lactone efflux protein 0.49 LU632_RS20435 sensor histidine kinase low > 73
Klebsiella pneumoniae MKP103 0.53 KDGMDA_09750 homoserine/homoserine lactone efflux protein 0.54 KDGMDA_26490 sensor histidine kinase low > 95
Klebsiella michiganensis M5al 0.53 BWI76_RS01255 homoserine/homoserine lactone efflux protein 0.55 BWI76_RS19475 signal transduction histidine kinase low > 92
Escherichia coli ECRC102 0.53 NIAGMN_12105 rhtB homoserine/homoserine lactone efflux protein 0.56 NIAGMN_21845 btsS two-component regulatory system sensor histidine kinase BtsS 0.61 8
Escherichia coli ECRC62 0.53 BNILDI_05050 rhtB homoserine/homoserine lactone efflux protein 0.56 BNILDI_14180 btsS two-component regulatory system sensor histidine kinase BtsS low > 75
Escherichia coli ECRC100 0.53 OKFHMN_14350 rhtB homoserine/homoserine lactone efflux protein 0.56 OKFHMN_23910 btsS two-component regulatory system sensor histidine kinase BtsS low > 79
Escherichia coli BW25113 0.53 b3824 rhtB neutral amino-acid efflux system (NCBI) 0.56 b2126 yehU predicted sensory kinase in two-component system with YehT (NCBI) low > 76
Escherichia fergusonii Becca 0.53 EFB2_04813 Homoserine/homoserine lactone efflux protein 0.56 EFB2_01730 Sensor histidine kinase BtsS low > 86
Escherichia coli Nissle 1917 0.53 ECOLIN_RS21945 homoserine/homoserine lactone efflux protein 0.56 ECOLIN_RS12455 two-component regulatory system sensor histidine kinase BtsS — —
Escherichia coli BL21 0.53 ECD_03703 homoserine, homoserine lactone and S-methyl-methionine efflux pump 0.56 ECD_02055 inner membrane putative sensory kinase in two-component system with YehT low > 61
Escherichia coli ECRC99 0.53 KEDOAH_13800 rhtB homoserine/homoserine lactone efflux protein 0.56 KEDOAH_04255 btsS two-component regulatory system sensor histidine kinase BtsS — —
Escherichia coli ECOR27 0.53 NOLOHH_06480 rhtB homoserine/homoserine lactone efflux protein 0.56 NOLOHH_15230 btsS two-component regulatory system sensor histidine kinase BtsS low > 76
Escherichia coli ECRC98 0.53 JDDGAC_17975 rhtB homoserine/homoserine lactone efflux protein 0.56 JDDGAC_28000 btsS two-component regulatory system sensor histidine kinase BtsS low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_04227 Homoserine/homoserine lactone efflux protein 0.56 OHPLBJKB_01585 Sensor histidine kinase BtsS low > 74
Escherichia coli ECRC101 0.53 MCAODC_04855 rhtB homoserine/homoserine lactone efflux protein 0.56 MCAODC_21250 btsS two-component regulatory system sensor histidine kinase BtsS low > 87
Escherichia coli ECOR38 0.52 HEPCGN_13050 rhtB homoserine/homoserine lactone efflux protein 0.56 HEPCGN_02635 btsS two-component regulatory system sensor histidine kinase BtsS low > 88
Enterobacter asburiae PDN3 0.52 EX28DRAFT_4489 The Resistance to Homoserine/Threonine (RhtB) Family protein 0.55 EX28DRAFT_0436 Putative regulator of cell autolysis low > 76
Enterobacter sp. TBS_079 0.52 MPMX20_04456 Homoserine/homoserine lactone efflux protein 0.55 MPMX20_03093 Sensor histidine kinase BtsS low > 85
Pectobacterium carotovorum WPP14 0.50 HER17_RS01405 homoserine/homoserine lactone efflux protein 0.60 HER17_RS01480 sensor histidine kinase low > 75
Erwinia amylovora T8 0.49 OLJFJH_06450 homoserine/homoserine lactone efflux protein 0.50 OLJFJH_08010 sensor histidine kinase low > 58
Dickeya dianthicola 67-19 0.49 HGI48_RS19990 homoserine/homoserine lactone efflux protein 0.57 HGI48_RS19860 sensor histidine kinase low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF250 Homoserine/homoserine lactone efflux protein 0.55 GFF3819 Autolysis histidine kinase LytS low > 78
Dickeya dadantii 3937 0.48 DDA3937_RS19835 homoserine/homoserine lactone efflux protein 0.56 DDA3937_RS19750 sensor histidine kinase low > 74
Rahnella sp. WP5 0.47 EX31_RS15220 homoserine/homoserine lactone efflux protein 0.54 EX31_RS00775 sensor histidine kinase low > 89
Pantoea sp. MT58 0.46 IAI47_18345 homoserine/homoserine lactone efflux protein 0.22 IAI47_05565 sensor histidine kinase low > 76
Pantoea agglomerans CFBP13505 P0401 0.46 PagCFBP13505_RS15325 homoserine/homoserine lactone efflux protein 0.22 PagCFBP13505_RS20115 sensor histidine kinase low > 74
Serratia liquefaciens MT49 0.45 IAI46_00780 homoserine/homoserine lactone efflux protein 0.58 IAI46_23620 sensor histidine kinase low > 87
Azospirillum brasilense Sp245 0.30 AZOBR_RS17395 lysine transporter LysE 0.59 AZOBR_RS22565 sensor histidine kinase low > 97
Azospirillum sp. SherDot2 0.28 MPMX19_05707 Homoserine/homoserine lactone efflux protein 0.61 MPMX19_06240 Sensor histidine kinase BtsS low > 112
Shewanella sp. ANA-3 0.26 Shewana3_0118 lysine exporter protein LysE/YggA (RefSeq) 0.57 Shewana3_2593 signal transduction histidine kinase, LytS (RefSeq) low > 73
Shewanella oneidensis MR-1 0.25 SO0122 transporter, LysE family (NCBI ptt file) 0.58 SO2822 sensor histidine kinase (NCBI ptt file) low > 76
Rhodospirillum rubrum S1H 0.25 Rru_A0328 Lysine exporter protein (LYSE/YGGA) (NCBI) 0.60 Rru_A0377 Signal Transduction Histidine Kinase (STHK), LytS (NCBI) low > 58
Shewanella loihica PV-4 0.24 Shew_3751 lysine exporter protein LysE/YggA (RefSeq) 0.57 Shew_2328 signal transduction histidine kinase, LytS (RefSeq) low > 60
Desulfovibrio vulgaris Miyazaki F 0.22 DvMF_2130 Lysine exporter protein (LYSE/YGGA) (RefSeq) 0.26 DvMF_1225 signal transduction histidine kinase, LytS (RefSeq) low > 51
Shewanella amazonensis SB2B 0.18 Sama_3631 amino acid transporter LysE (RefSeq) 0.58 Sama_1282 signal transduction histidine kinase, LytS (RefSeq) low > 62

Not shown: 49 genomes with orthologs for CSW01_00690 only; 3 genomes with orthologs for CSW01_03630 only