Conservation of cofitness between CSW01_16995 and CSW01_03280 in Vibrio cholerae E7946 ATCC 55056

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_16995 MFS transporter 1.0 CSW01_03280 16S rRNA methyltransferase 0.57 6
Serratia liquefaciens MT49 0.22 IAI46_18210 OFA family MFS transporter 0.39 IAI46_02860 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 87
Pectobacterium carotovorum WPP14 0.20 HER17_RS11560 OFA family MFS transporter 0.39 HER17_RS18080 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 75
Enterobacter asburiae PDN3 0.19 EX28DRAFT_3807 oxalate/formate antiporter family transporter 0.38 EX28DRAFT_3579 16S RNA G1207 methylase RsmC low > 76
Pantoea sp. MT58 0.19 IAI47_05625 MFS transporter 0.35 IAI47_16375 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.19 GFF2468 Putative transmembrane transport protein 0.38 GFF1031 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) low > 78
Escherichia coli ECOR38 0.19 HEPCGN_14940 yhjX Uncharacterized MFS-type transporter YhjX 0.39 HEPCGN_09305 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 88
Escherichia fergusonii Becca 0.19 EFB2_00260 putative MFS-type transporter YhjX 0.38 EFB2_04076 Ribosomal RNA small subunit methyltransferase C low > 86
Enterobacter sp. TBS_079 0.19 MPMX20_00187 putative MFS-type transporter YhjX 0.38 MPMX20_00669 Ribosomal RNA small subunit methyltransferase C low > 85
Escherichia coli Nissle 1917 0.19 ECOLIN_RS20300 MFS transporter 0.39 ECOLIN_RS25090 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 55
Escherichia coli ECRC101 0.19 MCAODC_06565 yhjX Uncharacterized MFS-type transporter YhjX 0.39 MCAODC_01815 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 87
Escherichia coli BL21 0.19 ECD_03397 pyruvate-inducible inner membrane protein, putative transporter 0.39 ECD_04246 16S rRNA m(2)G1207 methyltransferase, SAM-dependent low > 61
Escherichia coli ECRC100 0.19 OKFHMN_16050 yhjX Uncharacterized MFS-type transporter YhjX 0.39 OKFHMN_11300 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.60 68
Escherichia coli ECRC99 0.19 KEDOAH_12100 yhjX Uncharacterized MFS-type transporter YhjX 0.39 KEDOAH_16845 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC — —
Escherichia coli ECRC98 0.19 JDDGAC_19680 yhjX Uncharacterized MFS-type transporter YhjX 0.39 JDDGAC_14895 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 87
Rahnella sp. WP5 0.19 EX31_RS20650 OFA family MFS transporter 0.35 EX31_RS04120 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.26 88
Escherichia coli ECRC102 0.19 NIAGMN_13810 yhjX Uncharacterized MFS-type transporter YhjX 0.39 NIAGMN_09150 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 80
Klebsiella pneumoniae MKP103 0.18 KDGMDA_07640 oxalate/formate antiport family MFS transporter 0.35 KDGMDA_12350 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 95
Pantoea agglomerans CFBP13505 P0401 0.18 PagCFBP13505_RS20170 OFA family MFS transporter 0.35 PagCFBP13505_RS08520 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 74
Escherichia coli ECRC62 0.18 BNILDI_03550 yhjX Uncharacterized MFS-type transporter YhjX 0.38 BNILDI_07980 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 75
Escherichia coli ECOR27 0.18 NOLOHH_07995 yhjX Uncharacterized MFS-type transporter YhjX 0.38 NOLOHH_03620 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.18 OHPLBJKB_00159 putative MFS-type transporter YhjX 0.39 OHPLBJKB_03691 Ribosomal RNA small subunit methyltransferase C low > 74
Escherichia coli BW25113 0.18 b3547 yhjX predicted transporter (NCBI) 0.39 b4371 rsmC 16S ribosomal RNA m2G1207 methyltransferase (NCBI) low > 76
Dickeya dadantii 3937 0.18 DDA3937_RS09140 OFA family MFS transporter 0.37 DDA3937_RS03190 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 74
Klebsiella michiganensis M5al 0.18 BWI76_RS26905 oxalate/formate antiport family MFS transporter 0.38 BWI76_RS04080 16S rRNA (guanine(1207)-N(2))-methyltransferase low > 92
Dickeya dianthicola 67-19 0.17 HGI48_RS09180 OFA family MFS transporter 0.36 HGI48_RS03340 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 71
Dickeya dianthicola ME23 0.17 DZA65_RS09480 OFA family MFS transporter 0.36 DZA65_RS03385 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 75
Pseudomonas fluorescens FW300-N2E2 0.11 Pf6N2E2_3843 MFS permease 0.29 Pf6N2E2_3247 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) low > 103
Pseudomonas fluorescens FW300-N2C3 0.11 AO356_09820 MFS transporter 0.29 AO356_06940 16S rRNA methyltransferase low > 104
Pseudomonas fluorescens GW456-L13 0.11 PfGW456L13_363 MFS permease 0.29 PfGW456L13_1616 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) low > 87
Pseudomonas lactucae CFBP13502 0.11 GEMAOFIL_00531 hypothetical protein 0.29 GEMAOFIL_01108 Ribosomal RNA small subunit methyltransferase C — —
Pseudomonas sp. DMC3 0.11 GFF4100 hypothetical protein 0.29 GFF4455 Ribosomal RNA small subunit methyltransferase C low > 89
Pseudomonas fluorescens FW300-N2E3 0.11 AO353_12065 MFS transporter 0.28 AO353_14995 16S rRNA methyltransferase low > 101
Pseudomonas fluorescens SBW25 0.11 PFLU_RS01600 OFA family MFS transporter 0.29 PFLU_RS04570 class I SAM-dependent methyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.11 PFLU_RS01600 OFA family MFS transporter 0.29 PFLU_RS04570 class I SAM-dependent methyltransferase low > 109
Pseudomonas sp. RS175 0.11 PFR28_04928 hypothetical protein 0.30 PFR28_03623 Ribosomal RNA small subunit methyltransferase C low > 88
Pseudomonas simiae WCS417 0.11 PS417_01555 MFS transporter 0.29 PS417_04525 16S rRNA methyltransferase low > 88
Pseudomonas orientalis W4I3 0.11 QF045_RS04625 OFA family MFS transporter 0.29 QF045_RS07495 class I SAM-dependent methyltransferase low > 93
Rhizobium sp. OAE497 0.11 ABIE40_RS03715 MFS transporter 0.13 ABIE40_RS00360 class I SAM-dependent methyltransferase low > 107
Pseudomonas fluorescens FW300-N1B4 0.11 Pf1N1B4_1628 MFS permease 0.28 Pf1N1B4_2953 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) low > 87
Pseudomonas sp. SVBP6 0.11 COO64_RS00235 OFA family MFS transporter 0.30 COO64_RS03375 class I SAM-dependent methyltransferase low > 93
Pseudomonas syringae pv. syringae B728a 0.10 Psyr_4899 Major facilitator superfamily 0.31 Psyr_0986 16S rRNA m(2)G 1207 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.10 Psyr_4899 Major facilitator superfamily 0.31 Psyr_0986 16S rRNA m(2)G 1207 methyltransferase low > 86
Pseudomonas sp. BP01 0.10 JOY50_RS25495 OFA family MFS transporter 0.27 JOY50_RS19445 class I SAM-dependent methyltransferase low > 84
Pseudomonas putida KT2440 0.10 PP_0288 putative Oxalate/formate antiporter 0.27 PP_0761 Ribosomal RNA small subunit methyltransferase C low > 96
Pseudomonas sp. S08-1 0.08 OH686_04930 Uncharacterized MFS-type transporter 0.29 OH686_06345 16S rRNA (guanine(1207)-N(2))-methyltransferase low > 80
Pseudomonas segetis P6 0.07 MPMX49_01829 L-lactate transporter 0.26 MPMX49_03708 Ribosomal RNA small subunit methyltransferase C low > 75
Acinetobacter radioresistens SK82 0.07 MPMX26_02115 L-lactate transporter 0.27 MPMX26_02491 Ribosomal RNA small subunit methyltransferase C low > 36

Not shown: 32 genomes with orthologs for CSW01_16995 only; 11 genomes with orthologs for CSW01_03280 only