Conservation of cofitness between CSW01_06280 and CSW01_01555 in Vibrio cholerae E7946 ATCC 55056

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06280 succinylglutamate desuccinylase 1.0 CSW01_01555 ATP-dependent RNA helicase RhlB 0.76 5
Shewanella loihica PV-4 0.28 Shew_1924 succinylglutamate desuccinylase (RefSeq) 0.67 Shew_0339 ATP-dependent RNA helicase RhlB (RefSeq) — —
Shewanella amazonensis SB2B 0.28 Sama_1708 succinylglutamate desuccinylase (RefSeq) 0.64 Sama_3215 ATP-dependent RNA helicase RhlB (RefSeq) low > 62
Shewanella oneidensis MR-1 0.27 SO2338 astE succinylglutamate desuccinylase (NCBI ptt file) 0.66 SO0407 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) 0.26 64
Shewanella sp. ANA-3 0.27 Shewana3_2132 succinylglutamate desuccinylase (RefSeq) 0.65 Shewana3_0410 ATP-dependent RNA helicase RhlB (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.26 MIT1002_01538 Succinylglutamate desuccinylase 0.60 MIT1002_00515 ATP-dependent RNA helicase RhlB — —
Kangiella aquimarina DSM 16071 0.26 B158DRAFT_1551 succinylglutamate desuccinylase (EC 3.5.1.96) 0.53 B158DRAFT_0413 Superfamily II DNA and RNA helicases — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.25 GFF3496 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.72 GFF2892 ATP-dependent RNA helicase RhlB low > 78
Erwinia amylovora T8 0.25 OLJFJH_14785 succinylglutamate desuccinylase 0.71 OLJFJH_06265 ATP-dependent RNA helicase RhlB low > 58
Escherichia coli ECRC102 0.24 NIAGMN_01140 astE succinylglutamate desuccinylase 0.72 NIAGMN_12355 rhlB ATP-dependent RNA helicase RhlB low > 80
Escherichia coli Nissle 1917 0.24 ECOLIN_RS09725 succinylglutamate desuccinylase 0.72 ECOLIN_RS21700 ATP-dependent RNA helicase RhlB — —
Escherichia coli ECRC101 0.24 MCAODC_18485 astE succinylglutamate desuccinylase 0.72 MCAODC_05105 rhlB ATP-dependent RNA helicase RhlB low > 88
Escherichia coli BL21 0.24 ECD_01713 succinylglutamate desuccinylase 0.72 ECD_03658 ATP-dependent RNA helicase low > 61
Escherichia coli ECRC99 0.24 KEDOAH_01185 astE succinylglutamate desuccinylase 0.72 KEDOAH_13550 rhlB ATP-dependent RNA helicase RhlB — —
Escherichia coli ECRC98 0.24 JDDGAC_01500 astE succinylglutamate desuccinylase 0.72 JDDGAC_18220 rhlB ATP-dependent RNA helicase RhlB low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_01988 Succinylglutamate desuccinylase 0.72 OHPLBJKB_04274 ATP-dependent RNA helicase RhlB low > 74
Escherichia fergusonii Becca 0.24 EFB2_02249 Succinylglutamate desuccinylase 0.72 EFB2_04858 ATP-dependent RNA helicase RhlB low > 86
Escherichia coli BW25113 0.24 b1744 astE succinylglutamate desuccinylase (NCBI) 0.72 b3780 rhlB ATP-dependent RNA helicase (NCBI) low > 76
Pseudomonas sp. S08-1 0.24 OH686_21320 succinylglutamate desuccinylase 0.35 OH686_17780 ATP-dependent RNA helicase RhlB — —
Escherichia coli ECRC100 0.24 OKFHMN_26925 astE succinylglutamate desuccinylase 0.72 OKFHMN_14600 rhlB ATP-dependent RNA helicase RhlB low > 79
Escherichia coli ECOR27 0.24 NOLOHH_17440 astE succinylglutamate desuccinylase 0.72 NOLOHH_06735 rhlB ATP-dependent RNA helicase RhlB low > 76
Enterobacter asburiae PDN3 0.24 EX28DRAFT_1748 succinylglutamate desuccinylase (EC 3.5.1.96) 0.72 EX28DRAFT_4451 Superfamily II DNA and RNA helicases — —
Escherichia coli ECOR38 0.24 HEPCGN_05290 astE succinylglutamate desuccinylase 0.72 HEPCGN_13310 rhlB ATP-dependent RNA helicase RhlB low > 88
Pseudomonas putida KT2440 0.24 PP_4475 succinylglutamate desuccinylase 0.35 PP_1295 ATP-dependent RNA helicase RhlB low > 96
Escherichia coli ECRC62 0.24 BNILDI_16225 astE succinylglutamate desuccinylase 0.72 BNILDI_04790 rhlB ATP-dependent RNA helicase RhlB low > 75
Klebsiella michiganensis M5al 0.24 BWI76_RS11690 succinylglutamate desuccinylase 0.71 BWI76_RS01065 ATP-dependent RNA helicase RhlB low > 92
Enterobacter sp. TBS_079 0.24 MPMX20_01869 Succinylglutamate desuccinylase 0.71 MPMX20_04492 ATP-dependent RNA helicase RhlB low > 85
Pseudomonas sp. SVBP6 0.24 COO64_RS21585 astE succinylglutamate desuccinylase 0.36 COO64_RS11685 rhlB ATP-dependent RNA helicase RhlB low > 93
Pantoea sp. MT58 0.24 IAI47_11075 succinylglutamate desuccinylase 0.73 IAI47_18535 ATP-dependent RNA helicase RhlB low > 76
Pseudomonas fluorescens FW300-N1B4 0.24 Pf1N1B4_3447 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.35 Pf1N1B4_920 ATP-dependent RNA helicase RhlB low > 87
Pantoea agglomerans CFBP13505 P0401 0.24 PagCFBP13505_RS17520 succinylglutamate desuccinylase 0.73 PagCFBP13505_RS15530 ATP-dependent RNA helicase RhlB low > 74
Klebsiella pneumoniae MKP103 0.24 KDGMDA_19370 succinylglutamate desuccinylase 0.72 KDGMDA_09545 ATP-dependent RNA helicase RhlB low > 95
Rahnella sp. WP5 0.23 EX31_RS17390 succinylglutamate desuccinylase 0.71 EX31_RS15040 ATP-dependent RNA helicase RhlB low > 89
Acinetobacter radioresistens SK82 0.22 MPMX26_02247 Succinylglutamate desuccinylase 0.35 MPMX26_01113 ATP-dependent RNA helicase RhlB low > 36
Serratia liquefaciens MT49 0.22 IAI46_15315 succinylglutamate desuccinylase 0.71 IAI46_00575 ATP-dependent RNA helicase RhlB low > 86
Marinobacter adhaerens HP15 0.21 HP15_3034 succinylglutamate desuccinylase 0.38 HP15_2099 DEAD/DEAH box helicase domain protein low > 73
Acinetobacter baumannii LAC-4 0.20 RR41_RS01880 succinylglutamate desuccinylase 0.37 RR41_RS06305 ATP-dependent RNA helicase RhlB low > 55
Pseudomonas stutzeri RCH2 0.18 Psest_2717 Succinylglutamate desuccinylase 0.36 Psest_3166 Superfamily II DNA and RNA helicases low > 67

Not shown: 19 genomes with orthologs for CSW01_06280 only; 6 genomes with orthologs for CSW01_01555 only