Conservation of cofitness between CSW01_10360 and CSW01_01285 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10360 peptidase M16 1.0 CSW01_01285 perosamine synthetase 0.88 19
Shewanella loihica PV-4 0.46 Shew_2420 peptidase M16 domain-containing protein (RefSeq) 0.20 Shew_1319 DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) low > 60
Shewanella sp. ANA-3 0.45 Shewana3_1465 peptidase M16 domain-containing protein (RefSeq) 0.23 Shewana3_1303 polysaccharide biosynthesis protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.45 Sama_2163 M16 family peptidase (RefSeq) 0.27 Sama_2329 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.29 MIT1002_01291 Protease 3 precursor 0.22 MIT1002_01078 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase low > 70
Marinobacter adhaerens HP15 0.26 HP15_1211 protease III precursor 0.23 HP15_2398 aminotransferase, DegT/DnrJ/EryC1/StrS family — —
Pectobacterium carotovorum WPP14 0.20 HER17_RS16530 pitrilysin 0.24 HER17_RS06520 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 75
Dickeya dianthicola ME23 0.19 DZA65_RS05335 pitrilysin 0.25 DZA65_RS22610 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 75
Dickeya dianthicola 67-19 0.19 HGI48_RS04995 pitrilysin 0.26 HGI48_RS21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 71
Dickeya dadantii 3937 0.19 DDA3937_RS04985 pitrilysin 0.26 DDA3937_RS21390 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 74
Serratia liquefaciens MT49 0.19 IAI46_20410 pitrilysin 0.25 IAI46_11015 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 86
Erwinia tracheiphila HP pepo 2.2 0.18 IJEDHG_17200 ptrA pitrilysin 0.24 IJEDHG_02605 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase — —
Erwinia tracheiphila SCR3 0.18 LU632_RS06185 ptrA pitrilysin 0.24 LU632_RS16495 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.18 GFF1302 Protease III precursor (EC 3.4.24.55) 0.25 GFF1858 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) low > 78
Enterobacter sp. TBS_079 0.17 MPMX20_03684 Protease 3 0.24 MPMX20_04380 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 85
Pantoea sp. MT58 0.17 IAI47_03960 pitrilysin 0.25 IAI47_21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 76
Rahnella sp. WP5 0.17 EX31_RS13165 pitrilysin 0.24 EX31_RS14020 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 89
Enterobacter asburiae PDN3 0.17 EX28DRAFT_2896 Secreted/periplasmic Zn-dependent peptidases, insulinase-like 0.24 EX28DRAFT_4082 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis low > 76
Erwinia amylovora T8 0.17 OLJFJH_09095 pitrilysin 0.24 OLJFJH_17365 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 58
Pantoea agglomerans CFBP13505 P0401 0.17 PagCFBP13505_RS17005 pitrilysin 0.25 PagCFBP13505_RS12240 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 74
Escherichia coli BW25113 0.17 b2821 ptr protease III (NCBI) 0.22 b2253 arnB uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.17 OHPLBJKB_00909 Protease 3 0.22 OHPLBJKB_01458 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 74
Escherichia coli ECRC62 0.17 BNILDI_10410 ptrA pitrilysin 0.22 BNILDI_13535 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 75
Escherichia coli BL21 0.17 ECD_02669 protease III 0.24 ECD_01942 VioA, involved in dTDP-N-acetylviosamine synthesis — —
Escherichia coli ECOR27 0.17 NOLOHH_11930 ptrA pitrilysin 0.23 NOLOHH_14620 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 76
Escherichia coli ECRC101 0.17 MCAODC_10570 ptrA pitrilysin 0.54 MCAODC_20510 rfbE GDP-perosamine synthase RfbE/PerA — —
Escherichia coli ECRC99 0.17 KEDOAH_08085 ptrA pitrilysin 0.54 KEDOAH_03720 rfbE GDP-perosamine synthase RfbE/PerA — —
Escherichia coli ECRC100 0.17 OKFHMN_20045 ptrA pitrilysin 0.54 OKFHMN_24430 rfbE GDP-perosamine synthase RfbE/PerA low > 79
Escherichia coli ECRC102 0.17 NIAGMN_17815 ptrA pitrilysin 0.54 NIAGMN_22375 rfbE GDP-perosamine synthase RfbE/PerA — —
Escherichia coli ECRC98 0.17 JDDGAC_23710 ptrA pitrilysin 0.54 JDDGAC_28540 rfbE GDP-perosamine synthase RfbE/PerA low > 87
Escherichia coli Nissle 1917 0.17 ECOLIN_RS15835 pitrilysin 0.22 ECOLIN_RS13125 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 55
Klebsiella michiganensis M5al 0.17 BWI76_RS23235 pitrilysin 0.23 BWI76_RS26485 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 92
Escherichia fergusonii Becca 0.17 EFB2_01063 Protease 3 0.23 EFB2_01603 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 86
Escherichia coli ECOR38 0.17 HEPCGN_19300 ptrA pitrilysin 0.24 HEPCGN_03130 vioA dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase VioA — —
Klebsiella pneumoniae MKP103 0.16 KDGMDA_03815 pitrilysin 0.24 KDGMDA_07345 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 95
Pseudomonas fluorescens FW300-N2C3 0.08 AO356_14220 pyrroloquinoline quinone biosynthesis protein PqqF 0.22 AO356_03965 aminotransferase low > 104
Pseudomonas aeruginosa PA14 0.06 IKLFDK_09635 pyrroloquinoline quinone biosynthesis protein PqqF 0.25 IKLFDK_18130 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 100

Not shown: 1 genomes with orthologs for CSW01_10360 only; 60 genomes with orthologs for CSW01_01285 only