Conservation of cofitness between CSW01_13390 and CSW01_01085 in Vibrio cholerae E7946 ATCC 55056

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13390 phosphoenolpyruvate carboxylase 1.0 CSW01_01085 MurR/RpiR family transcriptional regulator 0.48 6
Serratia liquefaciens MT49 0.65 IAI46_24525 phosphoenolpyruvate carboxylase 0.40 IAI46_19515 MurR/RpiR family transcriptional regulator low > 87
Klebsiella pneumoniae MKP103 0.64 KDGMDA_09355 phosphoenolpyruvate carboxylase 0.38 KDGMDA_28415 MurR/RpiR family transcriptional regulator low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF2342 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.38 GFF2466 Sialic acid utilization regulator, RpiR family low > 78
Klebsiella michiganensis M5al 0.64 BWI76_RS00835 phosphoenolpyruvate carboxylase 0.38 BWI76_RS21290 DNA-binding transcriptional regulator low > 92
Pantoea sp. MT58 0.64 IAI47_00895 phosphoenolpyruvate carboxylase 0.36 IAI47_04910 MurR/RpiR family transcriptional regulator low > 76
Escherichia coli ECRC101 0.64 MCAODC_04095 ppc phosphoenolpyruvate carboxylase 0.36 MCAODC_12670 murR HTH-type transcriptional regulator MurR low > 87
Escherichia coli ECRC100 0.64 OKFHMN_13595 ppc phosphoenolpyruvate carboxylase 0.36 OKFHMN_22140 murR HTH-type transcriptional regulator MurR low > 79
Escherichia coli ECRC102 0.64 NIAGMN_11345 ppc phosphoenolpyruvate carboxylase 0.36 NIAGMN_19910 murR HTH-type transcriptional regulator MurR low > 80
Escherichia coli ECRC99 0.64 KEDOAH_14565 ppc phosphoenolpyruvate carboxylase 0.36 KEDOAH_06080 murR HTH-type transcriptional regulator MurR — —
Escherichia coli ECRC98 0.64 JDDGAC_17220 ppc phosphoenolpyruvate carboxylase 0.36 JDDGAC_26090 murR HTH-type transcriptional regulator MurR low > 87
Enterobacter asburiae PDN3 0.63 EX28DRAFT_4418 Phosphoenolpyruvate carboxylase, type 1 (EC 4.1.1.31) 0.35 EX28DRAFT_0085 transcriptional regulator, RpiR family low > 76
Escherichia coli BW25113 0.63 b3956 ppc phosphoenolpyruvate carboxylase (NCBI) 0.36 b2427 yfeT predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli BL21 0.63 ECD_03841 phosphoenolpyruvate carboxylase 0.36 ECD_02327 repressor for murPQ, MurNAc 6-P inducible low > 61
Escherichia coli ECOR27 0.63 NOLOHH_05740 ppc phosphoenolpyruvate carboxylase 0.36 NOLOHH_13820 murR HTH-type transcriptional regulator MurR low > 76
Escherichia coli ECRC62 0.63 BNILDI_05785 ppc phosphoenolpyruvate carboxylase 0.36 BNILDI_12685 murR HTH-type transcriptional regulator MurR low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_04094 Phosphoenolpyruvate carboxylase 0.36 OHPLBJKB_01296 HTH-type transcriptional regulator MurR low > 74
Escherichia coli Nissle 1917 0.63 ECOLIN_RS22835 phosphoenolpyruvate carboxylase 0.34 ECOLIN_RS14490 MurR/RpiR family transcriptional regulator low > 55
Escherichia coli ECOR38 0.63 HEPCGN_12240 ppc phosphoenolpyruvate carboxylase 0.36 HEPCGN_21315 murR HTH-type transcriptional regulator MurR low > 88
Escherichia fergusonii Becca 0.63 EFB2_04658 Phosphoenolpyruvate carboxylase 0.34 EFB2_01335 HTH-type transcriptional regulator MurR low > 86
Pantoea agglomerans CFBP13505 P0401 0.63 PagCFBP13505_RS18445 phosphoenolpyruvate carboxylase 0.36 PagCFBP13505_RS14800 MurR/RpiR family transcriptional regulator low > 74
Enterobacter sp. TBS_079 0.63 MPMX20_04524 Phosphoenolpyruvate carboxylase 0.35 MPMX20_03432 HTH-type transcriptional regulator MurR low > 85
Rahnella sp. WP5 0.63 EX31_RS14200 phosphoenolpyruvate carboxylase 0.36 EX31_RS21865 MurR/RpiR family transcriptional regulator low > 89
Erwinia tracheiphila HP pepo 2.2 0.62 IJEDHG_13035 ppc phosphoenolpyruvate carboxylase 0.34 IJEDHG_02995 MurR/RpiR family transcriptional regulator low > 61
Erwinia tracheiphila SCR3 0.62 LU632_RS19625 ppc phosphoenolpyruvate carboxylase 0.34 LU632_RS18000 MurR/RpiR family transcriptional regulator low > 73
Erwinia amylovora T8 0.62 OLJFJH_06110 Phosphoenolpyruvate carboxylase 0.35 OLJFJH_10280 MurR/RpiR family transcriptional regulator low > 58
Rhodanobacter sp. FW510-T8 0.22 OKGIIK_11820 ppc phosphoenolpyruvate carboxylase 0.18 OKGIIK_12345 rpiR transcriptional regulator low > 53
Dyella japonica UNC79MFTsu3.2 0.21 ABZR86_RS11555 phosphoenolpyruvate carboxylase 0.15 ABZR86_RS12100 MurR/RpiR family transcriptional regulator low > 74
Lysobacter sp. OAE881 0.21 ABIE51_RS18965 phosphoenolpyruvate carboxylase 0.19 ABIE51_RS13700 MurR/RpiR family transcriptional regulator low > 62
Rhodanobacter denitrificans MT42 0.21 LRK55_RS11810 phosphoenolpyruvate carboxylase 0.18 LRK55_RS11245 MurR/RpiR family transcriptional regulator low > 63
Rhodanobacter denitrificans FW104-10B01 0.21 LRK54_RS12075 phosphoenolpyruvate carboxylase 0.18 LRK54_RS11515 MurR/RpiR family transcriptional regulator low > 59
Rhodanobacter sp000427505 FW510-R12 0.21 LRK53_RS16490 phosphoenolpyruvate carboxylase 0.17 LRK53_RS17010 MurR/RpiR family transcriptional regulator low > 59
Caulobacter crescentus NA1000 0.19 CCNA_01560 phosphoenolpyruvate carboxylase 0.11 CCNA_01355 transcriptional regulator IolR low > 66
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_01560 phosphoenolpyruvate carboxylase 0.11 CCNA_01355 transcriptional regulator IolR low > 67
Bifidobacterium breve UCC2003 0.17 BBR_RS10525 phosphoenolpyruvate carboxylase 0.18 BBR_RS13225 MurR/RpiR family transcriptional regulator — —

Not shown: 67 genomes with orthologs for CSW01_13390 only; 0 genomes with orthologs for CSW01_01085 only