Conservation of cofitness between CSW01_01030 and CSW01_01065 in Vibrio cholerae E7946 ATCC 55056

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01030 AraC family transcriptional regulator 1.0 CSW01_01065 TonB-dependent siderophore receptor 0.63 2
Shewanella oneidensis MR-1 0.31 SO0766 transcriptional regulator, AraC/XylS family (NCBI ptt file) 0.11 SO1156 TonB-dependent receptor (NCBI ptt file) low > 76
Pseudomonas segetis P6 0.31 MPMX49_02683 HTH-type transcriptional activator RhaS 0.23 MPMX49_02234 Ferrichrome outer membrane transporter/phage receptor low > 75
Shewanella sp. ANA-3 0.31 Shewana3_3537 AraC family transcriptional regulator (RefSeq) 0.12 Shewana3_0983 TonB-dependent siderophore receptor (RefSeq) low > 73
Pseudomonas aeruginosa PA14 0.30 IKLFDK_07760 AraC family transcriptional regulator 0.26 IKLFDK_23075 TonB-dependent ferrichrome receptor FiuA low > 98
Pseudomonas aeruginosa PUPa3 0.30 DQ20_RS53855 AraC family transcriptional regulator 0.26 DQ20_RS36970 fiuA;inference=COORDINATES TonB-dependent ferrichrome receptor FiuA low > 101
Pseudomonas sp. SVBP6 0.30 COO64_RS23670 AraC family transcriptional regulator 0.24 COO64_RS22790 TonB-dependent siderophore receptor low > 93
Pseudomonas aeruginosa MRSN321 0.30 DY961_RS19745 AraC family transcriptional regulator 0.27 DY961_RS22355 TonB-dependent siderophore receptor low > 100
Shewanella loihica PV-4 0.29 Shew_1463 AraC family transcriptional regulator (RefSeq) 0.08 Shew_3841 TonB-dependent siderophore receptor (RefSeq) low > 60
Ralstonia solanacearum GMI1000 0.29 RS_RS22500 AraC family transcriptional regulator 0.25 RS_RS14625 TonB-dependent siderophore receptor low > 80
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_3131 L-rhamnose operon transcriptional activator RhaR 0.26 PfGW456L13_1133 Ferrichrome-iron receptor @ Ferric siderophore receptor, TonB dependent low > 87
Ralstonia solanacearum UW163 0.26 UW163_RS02330 AraC family transcriptional regulator 0.25 UW163_RS06950 TonB-dependent siderophore receptor — —
Ralstonia solanacearum IBSBF1503 0.26 RALBFv3_RS11255 AraC family transcriptional regulator 0.25 RALBFv3_RS06675 TonB-dependent siderophore receptor low > 76
Shewanella amazonensis SB2B 0.26 Sama_1551 AraC/XylS family transcriptional regulator (RefSeq) 0.21 Sama_2875 outer membrane protein (RefSeq) low > 62
Pseudomonas sp. RS175 0.21 PFR28_02366 HTH-type transcriptional activator RhaS 0.27 PFR28_04116 Ferrichrome outer membrane transporter/phage receptor low > 88
Pseudomonas fluorescens FW300-N2C3 0.20 AO356_24435 AraC family transcriptional regulator 0.28 AO356_14070 TonB-dependent receptor low > 104
Pseudomonas simiae WCS417 0.20 PS417_03390 AraC family transcriptional regulator 0.25 PS417_28535 TonB-dependent receptor 0.15 37
Pseudomonas fluorescens FW300-N2E2 0.20 Pf6N2E2_575 Transcriptional regulator, AraC family 0.27 Pf6N2E2_4746 Ferrichrome-iron receptor @ Ferric siderophore receptor, TonB dependent low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.13 GFF4608 L-rhamnose operon transcriptional activator RhaR 0.10 GFF5752 Ferrichrome-iron receptor low > 90
Erwinia tracheiphila HP pepo 2.2 0.13 IJEDHG_22880 rhaS HTH-type transcriptional activator RhaS 0.08 IJEDHG_12650 TonB-dependent siderophore receptor low > 61
Escherichia coli ECRC62 0.13 BNILDI_05505 rhaS HTH-type transcriptional activator RhaS 0.23 BNILDI_09005 fhuA ferrichrome porin FhuA low > 75
Escherichia coli BW25113 0.13 b3905 rhaS DNA-binding transcriptional activator, L-rhamnose-binding (NCBI) 0.23 b0150 fhuA ferrichrome outer membrane transporter (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.13 OHPLBJKB_04145 HTH-type transcriptional activator RhaS 0.23 OHPLBJKB_03512 Ferrichrome outer membrane transporter/phage receptor low > 74
Escherichia coli ECOR27 0.13 NOLOHH_06020 rhaS HTH-type transcriptional activator RhaS 0.23 NOLOHH_02665 fhuA ferrichrome porin FhuA low > 76
Escherichia coli BL21 0.13 ECD_03791 transcriptional activator of rhaBAD and rhaT 0.24 ECD_00149 ferrichrome outer membrane transporter low > 61
Escherichia coli ECRC98 0.13 JDDGAC_17515 rhaS HTH-type transcriptional activator RhaS 0.24 JDDGAC_13915 fhuA ferrichrome porin FhuA low > 87
Escherichia coli ECRC100 0.13 OKFHMN_13890 rhaS HTH-type transcriptional activator RhaS 0.24 OKFHMN_10320 fhuA ferrichrome porin FhuA low > 79
Escherichia coli ECRC102 0.13 NIAGMN_11645 rhaS HTH-type transcriptional activator RhaS 0.24 NIAGMN_08170 fhuA ferrichrome porin FhuA low > 80
Escherichia coli ECRC99 0.13 KEDOAH_14265 rhaS HTH-type transcriptional activator RhaS 0.24 KEDOAH_17835 fhuA ferrichrome porin FhuA — —
Escherichia coli ECRC101 0.13 MCAODC_04390 rhaS HTH-type transcriptional activator RhaS 0.24 MCAODC_00835 fhuA ferrichrome porin FhuA 0.25 27
Escherichia fergusonii Becca 0.13 EFB2_04712 HTH-type transcriptional activator RhaS 0.24 EFB2_03894 Ferrichrome outer membrane transporter/phage receptor low > 86
Escherichia coli Nissle 1917 0.12 ECOLIN_RS22500 HTH-type transcriptional activator RhaS 0.24 ECOLIN_RS00840 ferrichrome porin FhuA 0.73 5
Pseudomonas syringae pv. syringae B728a 0.12 Psyr_3543 transcriptional regulator, AraC family 0.14 Psyr_2229 TonB-dependent siderophore receptor low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.12 Psyr_3543 transcriptional regulator, AraC family 0.14 Psyr_2229 TonB-dependent siderophore receptor low > 86
Escherichia coli ECOR38 0.12 HEPCGN_12530 rhaS HTH-type transcriptional activator RhaS 0.24 HEPCGN_08270 fhuA ferrichrome porin FhuA low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.11 GFF2266 L-rhamnose operon regulatory protein RhaS 0.23 GFF4258 Ferrichrome-iron receptor low > 78

Not shown: 1 genomes with orthologs for CSW01_01030 only; 67 genomes with orthologs for CSW01_01065 only