Conservation of cofitness between CSW01_13250 and CSW01_01030 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13250 aspartate aminotransferase family protein 1.0 CSW01_01030 AraC family transcriptional regulator 0.42 14
Shewanella sp. ANA-3 0.72 Shewana3_0610 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.31 Shewana3_3537 AraC family transcriptional regulator (RefSeq) low > 73
Shewanella oneidensis MR-1 0.72 SO0617 argD acetylornithine aminotransferase (NCBI ptt file) 0.31 SO0766 transcriptional regulator, AraC/XylS family (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.71 Sama_1628 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.26 Sama_1551 AraC/XylS family transcriptional regulator (RefSeq) low > 62
Shewanella loihica PV-4 0.70 Shew_0578 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.29 Shew_1463 AraC family transcriptional regulator (RefSeq) low > 60
Pseudomonas sp. SVBP6 0.66 COO64_RS21615 aspartate aminotransferase family protein 0.30 COO64_RS23670 AraC family transcriptional regulator low > 93
Pseudomonas aeruginosa MRSN321 0.66 DY961_RS07995 aruC;inference=COORDINATES bifunctional succinylornithine transaminase/acetylornithine aminotransferase 0.30 DY961_RS19745 AraC family transcriptional regulator low > 100
Pseudomonas aeruginosa PUPa3 0.66 DQ20_RS44805 aruC;inference=COORDINATES bifunctional succinylornithine transaminase/acetylornithine aminotransferase 0.30 DQ20_RS53855 AraC family transcriptional regulator low > 101
Pseudomonas aeruginosa PA14 0.65 IKLFDK_03985 Succinylornithine transaminase/acetylornithine aminotransferase 0.30 IKLFDK_07760 AraC family transcriptional regulator low > 98
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme 0.12 Psyr_3543 transcriptional regulator, AraC family low > 86
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme 0.12 Psyr_3543 transcriptional regulator, AraC family low > 86
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_5665 Succinylornithine transaminase (EC 2.6.1.81) 0.20 Pf6N2E2_575 Transcriptional regulator, AraC family low > 103
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_1971 Succinylornithine transaminase (EC 2.6.1.81) 0.28 PfGW456L13_3131 L-rhamnose operon transcriptional activator RhaR low > 87
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_18725 acetylornithine aminotransferase 0.20 AO356_24435 AraC family transcriptional regulator low > 104
Pseudomonas simiae WCS417 0.63 PS417_21710 Succinylornithine transaminase (EC 2.6.1.81) (from data) 0.20 PS417_03390 AraC family transcriptional regulator low > 88
Pseudomonas segetis P6 0.63 MPMX49_03207 Succinylornithine transaminase/acetylornithine aminotransferase 0.31 MPMX49_02683 HTH-type transcriptional activator RhaS low > 75
Erwinia tracheiphila HP pepo 2.2 0.63 IJEDHG_12105 astC bifunctional succinylornithine transaminase/acetylornithine transaminase 0.13 IJEDHG_22880 rhaS HTH-type transcriptional activator RhaS low > 61
Erwinia tracheiphila SCR3 0.63 LU632_RS22810 aspartate aminotransferase family protein 0.13 LU632_RS11690 rhaS HTH-type transcriptional activator RhaS low > 73
Escherichia coli Nissle 1917 0.63 ECOLIN_RS19240 bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.12 ECOLIN_RS22500 HTH-type transcriptional activator RhaS low > 55
Escherichia fergusonii Becca 0.63 EFB2_00463 Acetylornithine/succinyldiaminopimelate aminotransferase 0.13 EFB2_04712 HTH-type transcriptional activator RhaS low > 86
Escherichia coli BL21 0.63 ECD_03210 bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase 0.13 ECD_03791 transcriptional activator of rhaBAD and rhaT low > 61
Escherichia coli BW25113 0.63 b3359 argD bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase (NCBI) 0.13 b3905 rhaS DNA-binding transcriptional activator, L-rhamnose-binding (NCBI) low > 76
Escherichia coli ECRC99 0.63 KEDOAH_10910 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.13 KEDOAH_14265 rhaS HTH-type transcriptional activator RhaS
Escherichia coli ECOR38 0.63 HEPCGN_16055 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.12 HEPCGN_12530 rhaS HTH-type transcriptional activator RhaS low > 88
Escherichia coli ECOR27 0.63 NOLOHH_09030 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.13 NOLOHH_06020 rhaS HTH-type transcriptional activator RhaS low > 76
Escherichia coli ECRC98 0.63 JDDGAC_20860 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.13 JDDGAC_17515 rhaS HTH-type transcriptional activator RhaS low > 87
Escherichia coli ECRC100 0.63 OKFHMN_17230 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.13 OKFHMN_13890 rhaS HTH-type transcriptional activator RhaS low > 79
Pseudomonas sp. RS175 0.63 PFR28_03283 Succinylornithine transaminase/acetylornithine aminotransferase 0.21 PFR28_02366 HTH-type transcriptional activator RhaS low > 88
Escherichia coli ECRC102 0.63 NIAGMN_15000 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.13 NIAGMN_11645 rhaS HTH-type transcriptional activator RhaS low > 80
Escherichia coli ECRC101 0.63 MCAODC_07760 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.13 MCAODC_04390 rhaS HTH-type transcriptional activator RhaS low > 87
Escherichia coli ECRC62 0.63 BNILDI_02490 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.13 BNILDI_05505 rhaS HTH-type transcriptional activator RhaS low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_00343 Acetylornithine/succinyldiaminopimelate aminotransferase 0.13 OHPLBJKB_04145 HTH-type transcriptional activator RhaS low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.62 GFF3710 Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) 0.11 GFF2266 L-rhamnose operon regulatory protein RhaS low > 78
Ralstonia solanacearum GMI1000 0.33 RS_RS12225 aspartate aminotransferase family protein 0.29 RS_RS22500 AraC family transcriptional regulator
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS04665 acetylornithine transaminase 0.26 RALBFv3_RS11255 AraC family transcriptional regulator
Ralstonia solanacearum UW163 0.33 UW163_RS09005 acetylornithine transaminase 0.26 UW163_RS02330 AraC family transcriptional regulator
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF3420 Acetylornithine aminotransferase (EC 2.6.1.11) 0.13 GFF4608 L-rhamnose operon transcriptional activator RhaR low > 90

Not shown: 86 genomes with orthologs for CSW01_13250 only; 0 genomes with orthologs for CSW01_01030 only