| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Caulobacter crescentus NA1000 | 1.0 | CCNA_02650 | | N-acetyl-anhydromuramyl-L-alanine amidase | 1.0 | CCNA_00800 | | cytochrome bd-type quinol oxidase, subunit 1 cydA | 0.89 | 3 |
| Caulobacter crescentus NA1000 Δfur | 1.00 | CCNA_02650 | | N-acetyl-anhydromuramyl-L-alanine amidase | 1.00 | CCNA_00800 | | cytochrome bd-type quinol oxidase, subunit 1 cydA | 0.62 | 19 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.68 | A4249_RS01470 | | N-acetylmuramoyl-L-alanine amidase | 0.21 | A4249_RS11595 | | cytochrome ubiquinol oxidase subunit I | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.46 | Ga0059261_0650 | | Negative regulator of beta-lactamase expression | 0.71 | Ga0059261_3824 | | Bacterial Cytochrome Ubiquinol Oxidase | low | > 68 |
| Agrobacterium fabrum C58 | 0.46 | Atu2113 | | N-acetylmuramoyl-L-alanine amidase | 0.63 | Atu4091 | | cytochrome d oxidase | low | > 89 |
| Bosea sp. OAE506 | 0.46 | ABIE41_RS12525 | | N-acetylmuramoyl-L-alanine amidase | 0.22 | ABIE41_RS22790 | | cytochrome ubiquinol oxidase subunit I | — | — |
| Sinorhizobium meliloti 1021 | 0.45 | SMc01854 | | amidase (AMPD protein) | 0.19 | SMc02255 | | quinol oxidase subunit I transmembrane protein | — | — |
| Rhizobium sp. OAE497 | 0.44 | ABIE40_RS11900 | | N-acetylmuramoyl-L-alanine amidase | 0.63 | ABIE40_RS20490 | | cytochrome ubiquinol oxidase subunit I | low | > 107 |
| Azospirillum brasilense Sp245 | 0.43 | AZOBR_RS12270 | | N-acetylmuramoyl-L-alanine amidase | 0.19 | AZOBR_RS21515 | | cytochrome D ubiquinol oxidase subunit I | low | > 97 |
| Rhodospirillum rubrum S1H | 0.41 | Rru_A0960 | | AmpD (negative regulator of AmpC) (NCBI) | 0.21 | Rru_A0560 | | Cytochrome bd ubiquinol oxidase, subunit I (NCBI) | low | > 58 |
| Azospirillum sp. SherDot2 | 0.40 | MPMX19_01668 | | N-acetylmuramoyl-L-alanine amidase AmiD | 0.25 | MPMX19_05024 | | Cytochrome bd-II ubiquinol oxidase subunit 1 | — | — |
| Pseudomonas simiae WCS417 | 0.32 | PS417_00440 | | N-acetylmuramoyl-L-alanine amidase | 0.20 | PS417_24350 | | cytochrome D ubiquinol oxidase subunit I | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.32 | AO353_10965 | | N-acetylmuramoyl-L-alanine amidase | 0.21 | AO353_25365 | | cytochrome D ubiquinol oxidase subunit I | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.31 | Pf6N2E2_4155 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) | 0.21 | Pf6N2E2_5068 | | putative Cytochrome bd2, subunit I | low | > 103 |
| Pseudomonas sp. S08-1 | 0.30 | OH686_12170 | | N-acetylmuramoyl-L-alanine amidase or 1,6-anhydro-N-acetylmuramyl-L-alanine amidase | 0.21 | OH686_01505 | | Cytochrome d ubiquinol oxidase subunit I | low | > 80 |
| Erwinia tracheiphila SCR3 | 0.30 | LU632_RS00215 | | N-acetylmuramoyl-L-alanine amidase | 0.57 | LU632_RS16065 | cydA | cytochrome ubiquinol oxidase subunit I | — | — |
| Pseudomonas stutzeri RCH2 | 0.28 | Psest_0189 | | Negative regulator of beta-lactamase expression | 0.57 | Psest_3025 | | Cytochrome bd-type quinol oxidase, subunit 1 | low | > 67 |
| Klebsiella michiganensis M5al | 0.27 | BWI76_RS09535 | | N-acetylmuramoyl-L-alanine amidase amid | 0.56 | BWI76_RS08495 | | cytochrome bd-I ubiquinol oxidase subunit I | low | > 92 |
| Enterobacter asburiae PDN3 | 0.26 | EX28DRAFT_2084 | | Negative regulator of beta-lactamase expression | 0.57 | EX28DRAFT_2259 | | Cytochrome bd-type quinol oxidase, subunit 1 | low | > 76 |
| Rahnella sp. WP5 | 0.26 | EX31_RS18620 | | N-acetylmuramoyl-L-alanine amidase | 0.56 | EX31_RS23460 | | cytochrome ubiquinol oxidase subunit I | low | > 89 |
| Enterobacter sp. TBS_079 | 0.25 | MPMX20_01510 | | N-acetylmuramoyl-L-alanine amidase AmiD | 0.57 | MPMX20_01361 | | Cytochrome bd-I ubiquinol oxidase subunit 1 | low | > 85 |
| Pantoea sp. MT58 | 0.25 | IAI47_12980 | | N-acetylmuramoyl-L-alanine amidase | 0.57 | IAI47_13725 | | cytochrome ubiquinol oxidase subunit I | low | > 76 |
| Serratia liquefaciens MT49 | 0.25 | IAI46_08440 | | N-acetylmuramoyl-L-alanine amidase | 0.56 | IAI46_06295 | | cytochrome ubiquinol oxidase subunit I | low | > 86 |
| Escherichia coli ECOR38 | 0.25 | HEPCGN_02150 | amiD | N-acetylmuramoyl-L-alanine amidase AmiD | 0.57 | HEPCGN_01425 | cydA | cytochrome ubiquinol oxidase subunit I | — | — |
| Escherichia coli ECOR27 | 0.25 | NOLOHH_22260 | amiD | N-acetylmuramoyl-L-alanine amidase AmiD | 0.57 | NOLOHH_23280 | cydA | cytochrome ubiquinol oxidase subunit I | — | — |
| Escherichia coli ECRC98 | 0.25 | JDDGAC_09500 | amiD | N-acetylmuramoyl-L-alanine amidase AmiD | 0.57 | JDDGAC_10500 | cydA | cytochrome ubiquinol oxidase subunit I | — | — |
| Escherichia coli BL21 | 0.25 | ECD_00872 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; OM lipoprotein | 0.57 | ECD_00692 | | cytochrome d terminal oxidase, subunit I | — | — |
| Escherichia coli ECRC102 | 0.25 | NIAGMN_03905 | amiD | N-acetylmuramoyl-L-alanine amidase AmiD | 0.57 | NIAGMN_04895 | cydA | cytochrome ubiquinol oxidase subunit I | — | — |
| Escherichia coli Nissle 1917 | 0.25 | ECOLIN_RS04615 | | N-acetylmuramoyl-L-alanine amidase AmiD | 0.57 | ECOLIN_RS03900 | | cytochrome ubiquinol oxidase subunit I | — | — |
| Escherichia fergusonii Becca | 0.25 | EFB2_03194 | | N-acetylmuramoyl-L-alanine amidase AmiD | 0.57 | EFB2_03374 | | Cytochrome bd-I ubiquinol oxidase subunit 1 | — | — |
| Escherichia coli ECRC100 | 0.25 | OKFHMN_05865 | amiD | N-acetylmuramoyl-L-alanine amidase AmiD | 0.57 | OKFHMN_06845 | cydA | cytochrome ubiquinol oxidase subunit I | — | — |
| Escherichia coli ECRC101 | 0.25 | MCAODC_25080 | amiD | N-acetylmuramoyl-L-alanine amidase AmiD | 0.57 | MCAODC_26065 | cydA | cytochrome ubiquinol oxidase subunit I | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.25 | OHPLBJKB_02801 | | N-acetylmuramoyl-L-alanine amidase AmiD | 0.57 | OHPLBJKB_02981 | | Cytochrome bd-I ubiquinol oxidase subunit 1 | — | — |
| Escherichia coli ECRC99 | 0.25 | KEDOAH_22045 | amiD | N-acetylmuramoyl-L-alanine amidase AmiD | 0.57 | KEDOAH_21120 | cydA | cytochrome ubiquinol oxidase subunit I | — | — |
| Escherichia coli ECRC62 | 0.25 | BNILDI_20515 | amiD | N-acetylmuramoyl-L-alanine amidase AmiD | 0.57 | BNILDI_21275 | cydA | cytochrome ubiquinol oxidase subunit I | — | — |
| Escherichia coli BW25113 | 0.25 | b0867 | ybjR | predicted amidase and lipoprotein (NCBI) | 0.57 | b0733 | cydA | cytochrome d terminal oxidase, polypeptide subunit I (VIMSS) | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.24 | GFF4915 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) | 0.58 | GFF4646 | | Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) | low | > 78 |
| Pectobacterium carotovorum WPP14 | 0.23 | HER17_RS12440 | | N-acetylmuramoyl-L-alanine amidase | 0.57 | HER17_RS07285 | | cytochrome ubiquinol oxidase subunit I | low | > 75 |
Not shown: 9 genomes with orthologs for CCNA_02650 only; 41 genomes with orthologs for CCNA_00800 only