Conservation of cofitness between BPHYT_RS16225 and BPHYT_RS14840 in Burkholderia phytofirmans PsJN

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS16225 D-alanyl-D-alanine carboxypeptidase 1.0 BPHYT_RS14840 lytic transglycosylase 0.72 1
Paraburkholderia bryophila 376MFSha3.1 0.83 H281DRAFT_04181 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) 0.92 H281DRAFT_03910 membrane-bound lytic murein transglycosylase B low > 103
Paraburkholderia graminis OAS925 0.82 ABIE53_003419 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) 0.89 ABIE53_003143 membrane-bound lytic murein transglycosylase B 0.71 2
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS02470 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.80 QEN71_RS04140 lytic murein transglycosylase B 0.77 1
Ralstonia solanacearum GMI1000 0.41 RS_RS02925 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.51 RS_RS04565 lytic murein transglycosylase B low > 80
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS03245 D-alanyl-D-alanine carboxypeptidase 0.52 RR42_RS04540 lytic transglycosylase low > 128
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS12220 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.51 RALBFv3_RS13830 lytic murein transglycosylase B 0.40 55
Ralstonia solanacearum UW163 0.41 UW163_RS01390 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.51 UW163_RS15980 lytic murein transglycosylase B — —
Ralstonia solanacearum PSI07 0.41 RPSI07_RS21110 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.51 RPSI07_RS19640 lytic murein transglycosylase B low > 81
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS08110 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.51 ABZR87_RS09520 lytic murein transglycosylase B low > 80
Pseudomonas sp. RS175 0.27 PFR28_01057 D-alanyl-D-alanine carboxypeptidase DacC 0.31 PFR28_03866 Membrane-bound lytic murein transglycosylase B low > 88
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_02595 D-alanyl-D-alanine carboxypeptidase 0.31 AO356_15320 lytic transglycosylase 0.34 64
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_2344 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.30 Pf6N2E2_4999 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) 0.49 6
Acidovorax sp. GW101-3H11 0.25 Ac3H11_670 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.33 Ac3H11_3197 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 79
Castellaniella sp019104865 MT123 0.24 ABCV34_RS15375 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.27 ABCV34_RS07050 lytic murein transglycosylase B low > 48
Variovorax sp. SCN45 0.24 GFF5516 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.35 GFF2666 Membrane-bound lytic murein transglycosylase B low > 127
Shewanella oneidensis MR-1 0.09 SO2394 dacB penicillin-binding protein 4 (NCBI ptt file) 0.24 SO1166 membrane-bound lytic transglycosylase, putative (NCBI ptt file) low > 76
Sphingomonas koreensis DSMZ 15582 0.06 Ga0059261_1299 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family 0.14 Ga0059261_0120 lytic murein transglycosylase low > 68

Not shown: 0 genomes with orthologs for BPHYT_RS16225 only; 34 genomes with orthologs for BPHYT_RS14840 only