| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS29625 | | 6-phosphogluconate dehydrogenase | 1.0 | BPHYT_RS14395 | | sugar dehydratase | 0.32 | 16 |
| Paraburkholderia graminis OAS925 | 0.97 | ABIE53_005122 | | 6-phosphogluconate dehydrogenase | 0.96 | ABIE53_003041 | | sigma-E factor negative regulatory protein RseB | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.97 | H281DRAFT_03046 | | 6-phosphogluconate dehydrogenase (decarboxylating) | 0.96 | H281DRAFT_04357 | | sigma E regulatory protein, MucB/RseB | low | > 103 |
| Paraburkholderia sabiae LMG 24235 | 0.93 | QEN71_RS20525 | | NADP-dependent phosphogluconate dehydrogenase | 0.87 | QEN71_RS04585 | | MucB/RseB C-terminal domain-containing protein | low | > 153 |
| Escherichia coli BL21 | 0.75 | ECD_01931 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.13 | ECD_02465 | | anti-sigma E factor, binds RseA | low | > 61 |
| Pantoea sp. MT58 | 0.75 | IAI47_07035 | | NADP-dependent phosphogluconate dehydrogenase | 0.12 | IAI47_04860 | | sigma-E factor regulatory protein RseB | — | — |
| Escherichia coli ECRC62 | 0.75 | BNILDI_14695 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.13 | BNILDI_11860 | rseB | sigma-E factor regulatory protein RseB | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.75 | OHPLBJKB_01659 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.13 | OHPLBJKB_01136 | | Sigma-E factor regulatory protein RseB | low | > 73 |
| Escherichia coli ECRC98 | 0.75 | JDDGAC_28580 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.13 | JDDGAC_25050 | rseB | sigma-E factor regulatory protein RseB | low | > 86 |
| Escherichia coli ECRC99 | 0.75 | KEDOAH_03680 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.13 | KEDOAH_06835 | rseB | sigma-E factor regulatory protein RseB | — | — |
| Escherichia coli ECOR38 | 0.75 | HEPCGN_03175 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.13 | HEPCGN_20530 | rseB | sigma-E factor regulatory protein RseB | low | > 87 |
| Escherichia coli ECRC101 | 0.75 | MCAODC_20470 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.13 | MCAODC_11915 | rseB | sigma-E factor regulatory protein RseB | low | > 87 |
| Escherichia coli ECRC102 | 0.75 | NIAGMN_22415 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.13 | NIAGMN_19155 | rseB | sigma-E factor regulatory protein RseB | — | — |
| Escherichia coli ECRC100 | 0.75 | OKFHMN_24470 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.13 | OKFHMN_21385 | rseB | sigma-E factor regulatory protein RseB | low | > 80 |
| Escherichia coli Nissle 1917 | 0.75 | ECOLIN_RS11990 | | NADP-dependent phosphogluconate dehydrogenase | 0.14 | ECOLIN_RS14550 | | sigma-E factor regulatory protein RseB | low | > 55 |
| Escherichia coli ECOR27 | 0.75 | NOLOHH_15785 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.13 | NOLOHH_13060 | rseB | sigma-E factor regulatory protein RseB | low | > 75 |
| Escherichia fergusonii Becca | 0.75 | EFB2_01826 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.13 | EFB2_01325 | | Sigma-E factor regulatory protein RseB | low | > 86 |
| Escherichia coli BW25113 | 0.75 | b2029 | gnd | 6-phosphogluconate dehydrogenase (NCBI) | 0.13 | b2571 | rseB | periplasmic negative regulator of sigmaE (NCBI) | low | > 76 |
| Dickeya dadantii 3937 | 0.74 | DDA3937_RS06805 | | NADP-dependent phosphogluconate dehydrogenase | 0.11 | DDA3937_RS15755 | | sigma-E factor regulatory protein RseB | low | > 74 |
| Enterobacter sp. TBS_079 | 0.74 | MPMX20_03014 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.14 | MPMX20_03442 | | Sigma-E factor regulatory protein RseB | low | > 85 |
| Klebsiella michiganensis M5al | 0.74 | BWI76_RS19025 | | phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) | 0.12 | BWI76_RS21345 | | sigma-E factor regulatory protein RseB | low | > 92 |
| Enterobacter asburiae PDN3 | 0.74 | EX28DRAFT_0529 | | 6-phosphogluconate dehydrogenase (decarboxylating) | 0.14 | EX28DRAFT_0074 | | sigma E regulatory protein, MucB/RseB | 0.80 | 3 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.74 | GFF3903 | | 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) | 0.14 | GFF2109 | | Sigma factor RpoE negative regulatory protein RseB precursor | low | > 78 |
| Dickeya dianthicola ME23 | 0.74 | DZA65_RS07180 | | NADP-dependent phosphogluconate dehydrogenase | 0.12 | DZA65_RS16920 | | sigma-E factor regulatory protein RseB | low | > 75 |
| Dickeya dianthicola 67-19 | 0.73 | HGI48_RS06840 | | NADP-dependent phosphogluconate dehydrogenase | 0.12 | HGI48_RS15840 | | sigma-E factor regulatory protein RseB | low | > 71 |
| Rahnella sp. WP5 | 0.73 | EX31_RS11475 | | NADP-dependent phosphogluconate dehydrogenase | 0.12 | EX31_RS21810 | | sigma-E factor regulatory protein RseB | — | — |
| Pectobacterium carotovorum WPP14 | 0.73 | HER17_RS14505 | | NADP-dependent phosphogluconate dehydrogenase | 0.10 | HER17_RS05790 | | sigma-E factor regulatory protein RseB | low | > 75 |
| Serratia liquefaciens MT49 | 0.73 | IAI46_08160 | | NADP-dependent phosphogluconate dehydrogenase | 0.12 | IAI46_19575 | | sigma-E factor regulatory protein RseB | — | — |
| Erwinia tracheiphila SCR3 | 0.72 | LU632_RS08890 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.13 | LU632_RS15415 | rseB | sigma-E factor regulatory protein RseB | low | > 74 |
| Variovorax sp. OAS795 | 0.58 | ABID97_RS10190 | | decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase | 0.28 | ABID97_RS08340 | | MucB/RseB C-terminal domain-containing protein | low | > 91 |
| Variovorax sp. SCN45 | 0.58 | GFF2954 | | 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) | 0.27 | GFF3865 | | Sigma factor RpoE negative regulatory protein RseB precursor | low | > 127 |
| Vibrio cholerae E7946 ATCC 55056 | 0.54 | CSW01_18635 | | phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) | 0.14 | CSW01_12475 | | sigma-E factor regulatory protein RseB | — | — |
| Shewanella loihica PV-4 | 0.45 | Shew_2561 | | 6-phosphogluconate dehydrogenase (RefSeq) | 0.10 | Shew_1050 | | sigma E regulatory protein, MucB/RseB (RefSeq) | low | > 60 |
| Shewanella oneidensis MR-1 | 0.45 | SO1902 | gnd | 6-phosphogluconate dehydrogenase, decarboxylating (NCBI ptt file) | 0.10 | SO1344 | rseB | sigma-E factor regulatory protein RseB (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.44 | Shewana3_1677 | | 6-phosphogluconate dehydrogenase (RefSeq) | 0.11 | Shewana3_3030 | | sigma E regulatory protein, MucB/RseB (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.44 | Sama_1365 | | 6-phosphogluconate dehydrogenase (RefSeq) | 0.09 | Sama_0876 | | putative sigma E regulatory protein, MucB/RseB (RefSeq) | low | > 62 |
Not shown: 18 genomes with orthologs for BPHYT_RS29625 only; 25 genomes with orthologs for BPHYT_RS14395 only