Conservation of cofitness between BPHYT_RS24160 and BPHYT_RS13765 in Burkholderia phytofirmans PsJN

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS24160 D-galactarate dehydratase 1.0 BPHYT_RS13765 LysR family transcriptional regulator 0.33 5
Paraburkholderia graminis OAS925 0.95 ABIE53_006505 galactarate dehydratase 0.92 ABIE53_002928 DNA-binding transcriptional LysR family regulator low > 113
Paraburkholderia bryophila 376MFSha3.1 0.94 H281DRAFT_05320 galactarate dehydratase 0.90 H281DRAFT_04477 transcriptional regulator, LysR family low > 103
Paraburkholderia sabiae LMG 24235 0.87 QEN71_RS33575 galactarate dehydratase 0.89 QEN71_RS05155 LysR family transcriptional regulator low > 153
Herbaspirillum seropedicae SmR1 0.75 HSERO_RS15800 Galactarate dehydratase (EC 4.2.1.42) (from data) 0.64 HSERO_RS10535 LysR family transcriptional regulator low > 78
Acidovorax sp. GW101-3H11 0.71 Ac3H11_3953 D-galactarate dehydratase (EC 4.2.1.42) 0.31 Ac3H11_3250 Transcriptional regulator, LysR family low > 79
Dickeya dadantii 3937 0.66 DDA3937_RS17065 galactarate dehydratase 0.32 DDA3937_RS11930 LysR family transcriptional regulator low > 74
Escherichia coli ECRC99 0.65 KEDOAH_09795 garD galactarate dehydratase 0.27 KEDOAH_10390 aaeR HTH-type transcriptional activator AaeR — —
Escherichia coli ECRC102 0.65 NIAGMN_16115 garD galactarate dehydratase 0.27 NIAGMN_15520 aaeR HTH-type transcriptional activator AaeR — —
Escherichia coli BL21 0.65 ECD_02993 D-galactarate dehydrogenase 0.27 ECD_03103 transcriptional regulator for aaeXAB operon low > 61
Escherichia coli ECRC100 0.65 OKFHMN_18355 garD galactarate dehydratase 0.27 OKFHMN_17760 aaeR HTH-type transcriptional activator AaeR low > 80
Escherichia coli ECRC98 0.65 JDDGAC_21985 garD galactarate dehydratase 0.27 JDDGAC_21385 aaeR HTH-type transcriptional activator AaeR low > 86
Escherichia coli BW25113 0.65 b3128 garD (D)-galactarate dehydrogenase (NCBI) 0.27 b3243 aaeR predicted DNA-binding transcriptional regulator, efflux system (NCBI) low > 76
Escherichia coli Nissle 1917 0.65 ECOLIN_RS17975 galactarate dehydratase 0.27 ECOLIN_RS18590 HTH-type transcriptional activator AaeR — —
Escherichia coli ECRC101 0.65 MCAODC_08865 garD galactarate dehydratase 0.27 MCAODC_08280 aaeR HTH-type transcriptional activator AaeR low > 87
Escherichia coli ECOR38 0.65 HEPCGN_17190 garD galactarate dehydratase 0.27 HEPCGN_16625 aaeR HTH-type transcriptional activator AaeR low > 87
Escherichia coli ECRC62 0.65 BNILDI_01395 garD galactarate dehydratase 0.27 BNILDI_01975 aaeR HTH-type transcriptional activator AaeR low > 75
Escherichia coli ECOR27 0.65 NOLOHH_10135 garD galactarate dehydratase 0.27 NOLOHH_09560 aaeR HTH-type transcriptional activator AaeR low > 75
Escherichia fergusonii Becca 0.65 EFB2_00691 Galactarate dehydratase (L-threo-forming) 0.27 EFB2_00587 HTH-type transcriptional regulator DmlR low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_00575 Galactarate dehydratase (L-threo-forming) 0.27 OHPLBJKB_00461 HTH-type transcriptional regulator DmlR low > 73
Dickeya dianthicola 67-19 0.65 HGI48_RS17115 galactarate dehydratase 0.28 HGI48_RS12020 LysR family transcriptional regulator low > 71
Pseudomonas sp. RS175 0.65 PFR28_00145 Galactarate dehydratase (L-threo-forming) 0.64 PFR28_03574 HTH-type transcriptional regulator DmlR low > 88
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_07170 galactarate dehydratase 0.64 AO356_17225 LysR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_3296 D-galactarate dehydratase (EC 4.2.1.42) 0.64 Pf6N2E2_5370 LysR family transcriptional regulator QseA low > 103
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF1534 D-galactarate dehydratase (EC 4.2.1.42) 0.26 GFF2141 LysR family transcriptional regulator QseA low > 78
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_1107 D-galactarate dehydratase (EC 4.2.1.42) 0.64 Pf1N1B4_1002 LysR family transcriptional regulator QseA low > 87
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_5042 D-galactarate dehydratase (EC 4.2.1.42) 0.64 PfGW456L13_1666 LysR family transcriptional regulator QseA low > 87
Pseudomonas simiae WCS417 0.64 PS417_04210 Galactarate dehydratase (EC 4.2.1.42) (from data) 0.63 PS417_04735 LysR family transcriptional regulator low > 88
Pseudomonas fluorescens SBW25 0.64 PFLU_RS04250 galactarate dehydratase 0.62 PFLU_RS04810 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS04250 galactarate dehydratase 0.62 PFLU_RS04810 LysR family transcriptional regulator low > 109
Pseudomonas stutzeri RCH2 0.63 Psest_0377 galactarate dehydratase 0.47 Psest_2183 Transcriptional regulator low > 67
Pseudomonas fluorescens FW300-N2E3 0.63 AO353_05290 galactarate dehydratase 0.63 AO353_04845 LysR family transcriptional regulator low > 101
Pseudomonas putida KT2440 0.62 PP_3601 galactarate dehydratase 0.68 PP_1262 LysR family transcriptional regulator 0.14 20
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_4225 galactarate dehydratase 0.62 Psyr_1044 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_4225 galactarate dehydratase 0.62 Psyr_1044 transcriptional regulator, LysR family low > 86

Not shown: 19 genomes with orthologs for BPHYT_RS24160 only; 0 genomes with orthologs for BPHYT_RS13765 only