Conservation of cofitness between BPHYT_RS16845 and BPHYT_RS01450 in Burkholderia phytofirmans PsJN

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS16845 spermidine synthase 1.0 BPHYT_RS01450 DNA-binding protein 0.28 4
Paraburkholderia bryophila 376MFSha3.1 0.78 H281DRAFT_06313 spermidine synthase (EC 2.5.1.16) 0.68 H281DRAFT_02242 DNA protecting protein DprA low > 103
Paraburkholderia graminis OAS925 0.76 ABIE53_003538 spermidine synthase 0.71 ABIE53_000387 DNA processing protein 0.39 1
Rahnella sp. WP5 0.27 EX31_RS03375 polyamine aminopropyltransferase 0.25 EX31_RS15970 DNA-protecting protein DprA low > 89
Dickeya dianthicola ME23 0.27 DZA65_RS17215 polyamine aminopropyltransferase 0.26 DZA65_RS20335 DNA-protecting protein DprA low > 75
Serratia liquefaciens MT49 0.26 IAI46_21290 polyamine aminopropyltransferase 0.23 IAI46_23260 DNA-protecting protein DprA low > 86
Dickeya dadantii 3937 0.26 DDA3937_RS16010 polyamine aminopropyltransferase 0.25 DDA3937_RS19120 DNA-protecting protein DprA low > 74
Dickeya dianthicola 67-19 0.26 HGI48_RS16130 polyamine aminopropyltransferase 0.26 HGI48_RS19210 DNA-protecting protein DprA low > 71
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.4910.1 Spermidine synthase (EC 2.5.1.16) 0.29 Xcc-8004.4746.1 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake — —
Pantoea sp. MT58 0.25 IAI47_15710 polyamine aminopropyltransferase 0.25 IAI47_02295 DNA-protecting protein DprA low > 76
Escherichia coli ECOR27 0.25 NOLOHH_02810 speE polyamine aminopropyltransferase 0.26 NOLOHH_09335 dprA DNA-protecting protein DprA low > 75
Escherichia coli ECRC98 0.25 JDDGAC_14060 speE polyamine aminopropyltransferase 0.26 JDDGAC_21165 dprA DNA-protecting protein DprA low > 86
Escherichia coli ECRC101 0.25 MCAODC_00980 speE polyamine aminopropyltransferase 0.26 MCAODC_08065 dprA DNA-protecting protein DprA low > 87
Escherichia fergusonii Becca 0.25 EFB2_03924 Polyamine aminopropyltransferase 0.26 EFB2_00538 hypothetical protein low > 86
Escherichia coli BL21 0.25 ECD_00120 spermidine synthase (putrescine aminopropyltransferase) 0.26 ECD_03136 DNA recombination-mediator A family protein low > 61
Escherichia coli ECRC102 0.25 NIAGMN_08315 speE polyamine aminopropyltransferase 0.26 NIAGMN_15305 dprA DNA-protecting protein DprA — —
Escherichia coli BW25113 0.25 b0121 speE spermidine synthase (NCBI) 0.26 b4473 smf hypothetical protein (NCBI) low > 76
Escherichia coli ECRC99 0.25 KEDOAH_17690 speE polyamine aminopropyltransferase 0.26 KEDOAH_10605 dprA DNA-protecting protein DprA — —
Escherichia coli ECOR38 0.25 HEPCGN_08445 speE polyamine aminopropyltransferase 0.26 HEPCGN_16365 dprA DNA-protecting protein DprA low > 87
Escherichia coli Nissle 1917 0.25 ECOLIN_RS00675 polyamine aminopropyltransferase 0.26 ECOLIN_RS18860 DNA-protecting protein DprA low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_03540 Polyamine aminopropyltransferase 0.26 OHPLBJKB_00418 hypothetical protein low > 73
Escherichia coli ECRC62 0.25 BNILDI_08800 speE polyamine aminopropyltransferase 0.26 BNILDI_02185 dprA DNA-protecting protein DprA low > 75
Dyella japonica UNC79MFTsu3.2 0.25 ABZR86_RS15575 polyamine aminopropyltransferase 0.30 ABZR86_RS13870 DNA-processing protein DprA — —
Klebsiella michiganensis M5al 0.25 BWI76_RS04925 spermidine synthase 0.26 BWI76_RS25665 DNA-processing protein DprA low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.25 GFF107 Spermidine synthase (EC 2.5.1.16) 0.26 GFF2393 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake low > 78
Enterobacter sp. TBS_079 0.25 MPMX20_00815 Polyamine aminopropyltransferase 0.25 MPMX20_04193 hypothetical protein low > 85
Rhodanobacter sp. FW510-T8 0.25 OKGIIK_15620 speE polyamine aminopropyltransferase 0.31 OKGIIK_13770 dprA DNA-processing protein DprA — —
Pectobacterium carotovorum WPP14 0.25 HER17_RS05505 polyamine aminopropyltransferase 0.24 HER17_RS02230 DNA-protecting protein DprA low > 75
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS09135 polyamine aminopropyltransferase 0.33 LRK54_RS10145 DNA-processing protein DprA — —
Enterobacter asburiae PDN3 0.25 EX28DRAFT_3718 spermidine synthase 0.26 EX28DRAFT_0042 DNA protecting protein DprA low > 76
Rhodanobacter denitrificans MT42 0.25 LRK55_RS08665 polyamine aminopropyltransferase 0.33 LRK55_RS09785 DNA-processing protein DprA — —
Erwinia tracheiphila SCR3 0.24 LU632_RS20150 speE polyamine aminopropyltransferase 0.26 LU632_RS22465 dprA DNA-protecting protein DprA low > 74
Azospirillum brasilense Sp245 0.24 AZOBR_RS02020 spermidine synthase 0.27 AZOBR_RS15885 DNA processing protein DprA low > 97
Kangiella aquimarina DSM 16071 0.21 B158DRAFT_1810 spermidine synthase 0.29 B158DRAFT_0400 DNA protecting protein DprA low > 40

Not shown: 13 genomes with orthologs for BPHYT_RS16845 only; 31 genomes with orthologs for BPHYT_RS01450 only