Conservation of cofitness between BNILDI_15710 and BNILDI_17235 in Escherichia coli ECRC62

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_15710 copD copper homeostasis membrane protein CopD 1.0 BNILDI_17235 yneJ Uncharacterized HTH-type transcriptional regulator YneJ 0.68 17
Escherichia coli ECOR27 1.00 NOLOHH_16915 copD copper homeostasis membrane protein CopD 1.00 NOLOHH_18755 yneJ Uncharacterized HTH-type transcriptional regulator YneJ low > 75
Escherichia coli BW25113 0.99 b1840 yebZ predicted inner membrane protein (NCBI) 0.98 b1526 yneJ predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01891 Inner membrane protein YebZ 0.98 OHPLBJKB_02193 HTH-type transcriptional regulator GltR low > 73
Escherichia coli ECRC102 0.98 NIAGMN_01655 copD copper homeostasis membrane protein CopD 0.98 NIAGMN_25250 yneJ Uncharacterized HTH-type transcriptional regulator YneJ — —
Escherichia coli ECRC99 0.98 KEDOAH_01700 copD copper homeostasis membrane protein CopD 0.98 KEDOAH_27325 yneJ Uncharacterized HTH-type transcriptional regulator YneJ — —
Escherichia coli ECRC98 0.98 JDDGAC_00980 copD copper homeostasis membrane protein CopD 0.98 JDDGAC_03615 yneJ Uncharacterized HTH-type transcriptional regulator YneJ — —
Escherichia coli ECRC101 0.98 MCAODC_19000 copD copper homeostasis membrane protein CopD 0.98 MCAODC_16820 yneJ Uncharacterized HTH-type transcriptional regulator YneJ low > 87
Escherichia coli ECRC100 0.98 OKFHMN_26405 copD copper homeostasis membrane protein CopD 0.98 OKFHMN_01105 yneJ Uncharacterized HTH-type transcriptional regulator YneJ — —
Escherichia fergusonii Becca 0.98 EFB2_02104 Inner membrane protein YebZ 0.99 EFB2_02434 HTH-type transcriptional regulator GltR low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS10245 copper homeostasis membrane protein CopD 0.99 ECOLIN_RS08715 LysR family transcriptional regulator — —
Escherichia coli BL21 0.97 ECD_01811 inner membrane protein 0.98 ECD_01483 putative DNA-binding transcriptional regulator — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF1619 Copper resistance protein D 0.83 GFF2510 LysR family transcriptional regulator YneJ low > 78
Enterobacter sp. TBS_079 0.52 MPMX20_02747 Inner membrane protein YebZ 0.83 MPMX20_02268 HTH-type transcriptional regulator GltR low > 85
Enterobacter asburiae PDN3 0.50 EX28DRAFT_0714 Putative copper export protein 0.82 EX28DRAFT_1199 Transcriptional regulator low > 76
Klebsiella michiganensis M5al 0.49 BWI76_RS18055 copper resistance protein D 0.81 BWI76_RS15210 LysR family transcriptional regulator low > 92
Dickeya dianthicola 67-19 0.30 HGI48_RS10195 copper homeostasis membrane protein CopD 0.46 HGI48_RS09355 LysR family transcriptional regulator low > 71
Rahnella sp. WP5 0.30 EX31_RS24775 copper homeostasis membrane protein CopD 0.68 EX31_RS00185 LysR family transcriptional regulator low > 89
Serratia liquefaciens MT49 0.29 IAI46_10010 copper homeostasis membrane protein CopD 0.50 IAI46_07890 LysR family transcriptional regulator low > 86
Dickeya dianthicola ME23 0.28 DZA65_RS10610 copper homeostasis membrane protein CopD 0.46 DZA65_RS09660 LysR family transcriptional regulator low > 75
Pantoea sp. MT58 0.28 IAI47_08535 copper homeostasis membrane protein CopD 0.51 IAI47_06710 LysR family transcriptional regulator low > 76
Dickeya dadantii 3937 0.28 DDA3937_RS10165 copper homeostasis membrane protein CopD 0.46 DDA3937_RS09330 LysR family transcriptional regulator low > 74
Pseudomonas fluorescens FW300-N2E3 0.15 AO353_26595 copper resistance protein CopD 0.48 AO353_18385 LysR family transcriptional regulator low > 101
Ralstonia solanacearum UW163 0.14 UW163_RS22015 copper resistance protein CopD 0.34 UW163_RS00325 LysR family transcriptional regulator — —
Ralstonia solanacearum IBSBF1503 0.14 RALBFv3_RS20880 copper resistance protein CopD 0.34 RALBFv3_RS13245 LysR family transcriptional regulator low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.14 Psyr_1496 Copper resistance D 0.66 Psyr_2395 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a 0.14 Psyr_1496 Copper resistance D 0.66 Psyr_2395 transcriptional regulator, LysR family low > 86
Pseudomonas fluorescens SBW25 0.13 PFLU_RS19275 copper homeostasis membrane protein CopD 0.66 PFLU_RS20670 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.13 PFLU_RS19275 copper homeostasis membrane protein CopD 0.66 PFLU_RS20670 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens FW300-N1B4 0.12 Pf1N1B4_47 Copper resistance protein D 0.48 Pf1N1B4_532 Transcriptional regulators, LysR family low > 87
Pseudomonas fluorescens GW456-L13 0.12 PfGW456L13_3977 Copper resistance protein D 0.65 PfGW456L13_3879 LysR family transcriptional regulator YneJ low > 87
Pseudomonas sp. RS175 0.11 PFR28_03392 Copper resistance protein D 0.49 PFR28_00773 HTH-type transcriptional regulator GltR low > 88
Ralstonia sp. UNC404CL21Col 0.11 ABZR87_RS21870 copper homeostasis membrane protein CopD 0.33 ABZR87_RS09325 LysR family transcriptional regulator low > 80
Ralstonia solanacearum PSI07 0.11 RPSI07_RS02375 copper resistance protein CopD 0.33 RPSI07_RS19975 LysR family transcriptional regulator low > 81
Pseudomonas fluorescens FW300-N2C3 0.11 AO356_18125 copper resistance protein CopD 0.48 AO356_04115 LysR family transcriptional regulator low > 104
Pseudomonas simiae WCS417 0.11 PS417_17350 copper resistance protein CopD 0.64 PS417_18700 LysR family transcriptional regulator low > 88
Pseudomonas fluorescens FW300-N2E2 0.10 Pf6N2E2_5549 Copper resistance protein D 0.48 Pf6N2E2_2660 Transcriptional regulators, LysR family low > 103

Not shown: 3 genomes with orthologs for BNILDI_15710 only; 19 genomes with orthologs for BNILDI_17235 only