Conservation of cofitness between BNILDI_14450 and BNILDI_12020 in Escherichia coli ECRC62

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_14450 mdtC multidrug efflux RND transporter permease subunit MdtC 1.0 BNILDI_12020 yphB Uncharacterized protein YphB 0.66 16
Escherichia coli ECOR27 1.00 NOLOHH_15535 mdtC multidrug efflux RND transporter permease subunit MdtC 0.99 NOLOHH_13220 yphB Uncharacterized protein YphB low > 75
Escherichia coli BL21 1.00 ECD_01981 multidrug efflux system, subunit C 0.99 ECD_02436 mutarotase superfamily protein, YphB family low > 61
Escherichia coli ECRC98 1.00 JDDGAC_28300 mdtC multidrug efflux RND transporter permease subunit MdtC 0.98 JDDGAC_25225 yphB Uncharacterized protein YphB low > 86
Escherichia coli ECRC100 1.00 OKFHMN_24190 mdtC multidrug efflux RND transporter permease subunit MdtC 0.98 OKFHMN_21550 yphB Uncharacterized protein YphB low > 80
Escherichia coli ECRC99 1.00 KEDOAH_03960 mdtC multidrug efflux RND transporter permease subunit MdtC 0.98 KEDOAH_06670 yphB Uncharacterized protein YphB — —
Escherichia coli ECRC102 1.00 NIAGMN_22135 mdtC multidrug efflux RND transporter permease subunit MdtC 0.98 NIAGMN_19320 yphB Uncharacterized protein YphB — —
Escherichia coli ECRC101 1.00 MCAODC_20750 mdtC multidrug efflux RND transporter permease subunit MdtC 0.98 MCAODC_12080 yphB Uncharacterized protein YphB low > 87
Escherichia coli BW25113 1.00 b2076 mdtC multidrug efflux system, subunit C (NCBI) 0.99 b2544 yphB hypothetical protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01628 Multidrug resistance protein MdtC 0.99 OHPLBJKB_01165 putative protein YphB low > 73
Escherichia coli ECOR38 0.99 HEPCGN_02880 mdtC multidrug efflux RND transporter permease subunit MdtC 0.97 HEPCGN_20690 yphB Uncharacterized protein YphB low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS12205 multidrug efflux RND transporter permease subunit MdtC 0.97 ECOLIN_RS14405 aldose 1-epimerase — —
Escherichia fergusonii Becca 0.99 EFB2_01779 Multidrug resistance protein MdtC 0.97 EFB2_01352 putative protein YphB low > 86
Klebsiella michiganensis M5al 0.90 BWI76_RS19260 multidrug transporter subunit MdtC 0.23 BWI76_RS21200 aldose epimerase low > 92
Serratia liquefaciens MT49 0.82 IAI46_18980 multidrug efflux RND transporter permease subunit MdtC 0.50 IAI46_21790 aldose 1-epimerase low > 86
Ralstonia solanacearum PSI07 0.63 RPSI07_RS05520 nodulation protein 0.23 RPSI07_RS11410 aldose 1-epimerase low > 81
Ralstonia solanacearum GMI1000 0.63 RS_RS22920 nodulation protein 0.21 RS_RS13780 aldose 1-epimerase low > 80
Ralstonia solanacearum UW163 0.63 UW163_RS21015 nodulation protein 0.17 UW163_RS12070 aldose 1-epimerase — —
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS18115 nodulation protein 0.17 RALBFv3_RS14600 aldose 1-epimerase low > 76
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS19020 multidrug efflux RND transporter permease subunit 0.23 ABZR87_RS01460 aldose 1-epimerase low > 80
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS07655 nodulation protein 0.30 HSERO_RS05165 galactose-1-epimerase low > 78
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_3265 Acriflavin resistance plasma membrane protein 0.22 PfGW456L13_3510 Aldose 1-epimerase low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_2484 Acriflavin resistance protein 0.24 Psyr_0896 Aldose 1-epimerase low > 86
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_2484 Acriflavin resistance protein 0.24 Psyr_0896 Aldose 1-epimerase low > 86
Pseudomonas fluorescens SBW25 0.53 PFLU_RS13435 MMPL family transporter 0.22 PFLU_RS19310 aldose 1-epimerase low > 109
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS13435 MMPL family transporter 0.22 PFLU_RS19310 aldose 1-epimerase low > 109
Pseudomonas stutzeri RCH2 0.53 Psest_2140 Cation/multidrug efflux pump 0.21 Psest_0379 Galactose mutarotase and related enzymes low > 67
Pseudomonas simiae WCS417 0.53 PS417_12750 acriflavine resistance protein B 0.21 PS417_17385 aldose epimerase low > 88
Pseudomonas putida KT2440 0.53 PP_3583 multidrug efflux transport system - membrane subunit 0.19 PP_1165 conserved protein of unknown function low > 96
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_1271 Acriflavin resistance plasma membrane protein 0.21 Pf6N2E2_484 Aldose 1-epimerase low > 103
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_25880 acriflavine resistance protein B 0.20 AO356_23040 aldose epimerase low > 104
Pseudomonas sp. RS175 0.51 PFR28_02193 Multidrug resistance protein MdtC 0.21 PFR28_02441 putative protein YphB low > 88
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS29845 efflux RND transporter permease subunit 0.25 QEN71_RS27070 aldose 1-epimerase low > 153
Bosea sp. OAE506 0.41 ABIE41_RS20140 efflux RND transporter permease subunit 0.19 ABIE41_RS03780 hypothetical protein low > 77
Rhizobium sp. OAE497 0.39 ABIE40_RS05760 efflux RND transporter permease subunit 0.35 ABIE40_RS17070 aldose 1-epimerase low > 107
Sinorhizobium meliloti 1021 0.23 SMc01457 transport transmembrane protein 0.24 SMa0077 hypothetical protein low > 103
Caulobacter crescentus NA1000 0.20 CCNA_03301 cation/multidrug efflux pump AcrB 0.22 CCNA_03432 aldose 1-epimerase low > 66
Caulobacter crescentus NA1000 Δfur 0.20 CCNA_03301 cation/multidrug efflux pump AcrB 0.22 CCNA_03432 aldose 1-epimerase low > 67

Not shown: 26 genomes with orthologs for BNILDI_14450 only; 3 genomes with orthologs for BNILDI_12020 only