Conservation of cofitness between BNILDI_05030 and BNILDI_01495 in Escherichia coli ECRC62

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_05030 yigI thioesterase family protein 1.0 BNILDI_01495 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.67 14
Escherichia coli BW25113 1.00 b3820 yigI orf, hypothetical protein (VIMSS) 0.99 b3146 yraL predicted methyltransferase (NCBI) low > 76
Escherichia coli ECRC98 1.00 JDDGAC_17995 yigI thioesterase family protein 0.99 JDDGAC_21860 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.50 71
Escherichia coli ECRC102 1.00 NIAGMN_12125 yigI thioesterase family protein 0.99 NIAGMN_15995 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS21925 acyl-CoA thioesterase YigI 0.99 ECOLIN_RS18085 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 55
Escherichia fergusonii Becca 1.00 EFB2_04817 hypothetical protein 0.99 EFB2_00677 Ribosomal RNA small subunit methyltransferase I low > 86
Escherichia coli ECRC99 1.00 KEDOAH_13780 yigI thioesterase family protein 0.99 KEDOAH_09915 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Escherichia coli ECOR38 1.00 HEPCGN_13070 yigI thioesterase family protein 0.99 HEPCGN_17110 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 87
Escherichia coli ECRC101 1.00 MCAODC_04875 yigI thioesterase family protein 0.99 MCAODC_08755 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 87
Escherichia coli ECOR27 1.00 NOLOHH_06500 yigI thioesterase family protein 1.00 NOLOHH_10035 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 75
Escherichia coli BL21 1.00 ECD_03699 4HBT thioesterase family protein 0.99 ECD_03013 16S rRNA C1402 2'-O-ribose methyltransferase, SAM-dependent low > 61
Escherichia coli ECRC100 1.00 OKFHMN_14370 yigI thioesterase family protein 0.99 OKFHMN_18235 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04231 hypothetical protein 0.99 OHPLBJKB_00555 Ribosomal RNA small subunit methyltransferase I low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF246 putative protein PaaI, possibly involved in aromatic compounds catabolism 0.91 GFF1521 rRNA small subunit methyltransferase I low > 78
Enterobacter sp. TBS_079 0.95 MPMX20_04460 hypothetical protein 0.88 MPMX20_04050 Ribosomal RNA small subunit methyltransferase I low > 85
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4485 uncharacterized domain 1 0.88 EX28DRAFT_3195 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 76
Klebsiella michiganensis M5al 0.92 BWI76_RS01235 hypothetical protein 0.87 BWI76_RS24910 rRNA (cytidine-2'-O-)-methyltransferase low > 92
Pantoea sp. MT58 0.76 IAI47_18370 thioesterase family protein 0.77 IAI47_02850 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 76
Serratia liquefaciens MT49 0.69 IAI46_00760 thioesterase family protein 0.76 IAI46_22295 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 86
Pectobacterium carotovorum WPP14 0.66 HER17_RS01385 thioesterase family protein 0.81 HER17_RS19860 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS20015 thioesterase family protein 0.79 HGI48_RS01610 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 71
Dickeya dianthicola ME23 0.65 DZA65_RS21055 thioesterase family protein 0.78 DZA65_RS01685 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 75
Rahnella sp. WP5 0.65 EX31_RS15200 thioesterase family protein 0.78 EX31_RS12550 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 89
Dickeya dadantii 3937 0.65 DDA3937_RS19860 thioesterase family protein 0.78 DDA3937_RS01715 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 74
Shewanella oneidensis MR-1 0.50 SO4242 conserved hypothetical protein (NCBI ptt file) 0.59 SO0301 hypothetical methyltransferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.49 Shewana3_3764 hypothetical protein (RefSeq) 0.58 Shewana3_3879 hypothetical protein (RefSeq) low > 73
Pseudomonas stutzeri RCH2 0.46 Psest_3735 uncharacterized domain 1 0.57 Psest_3270 probable S-adenosylmethionine-dependent methyltransferase, YraL family low > 67
Shewanella loihica PV-4 0.46 Shew_3475 hypothetical protein (RefSeq) 0.62 Shew_0228 uroporphyrin-III C/tetrapyrrole methyltransferase (RefSeq) low > 60
Pseudomonas sp. S08-1 0.45 OH686_13975 Uncharacterized protein YigI 0.54 OH686_08340 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 80
Alteromonas macleodii MIT1002 0.41 MIT1002_00149 putative domain 1 0.48 MIT1002_03113 Ribosomal RNA small subunit methyltransferase I low > 70
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF485 putative protein PaaI, possibly involved in aromatic compounds catabolism 0.32 GFF2715 rRNA small subunit methyltransferase I low > 90
Acidovorax sp. GW101-3H11 0.28 Ac3H11_1941 putative protein PaaI, possibly involved in aromatic compounds catabolism 0.35 Ac3H11_4466 rRNA small subunit methyltransferase I — —
Dinoroseobacter shibae DFL-12 0.19 Dshi_0843 thioesterase superfamily protein (RefSeq) 0.36 Dshi_2831 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase (RefSeq) low > 64
Burkholderia phytofirmans PsJN 0.17 BPHYT_RS26185 thioesterase 0.39 BPHYT_RS01940 16S rRNA methyltransferase low > 109
Pseudomonas fluorescens SBW25 0.16 PFLU_RS01270 PaaI family thioesterase 0.55 PFLU_RS04655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.16 PFLU_RS01270 PaaI family thioesterase 0.55 PFLU_RS04655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 109

Not shown: 1 genomes with orthologs for BNILDI_05030 only; 54 genomes with orthologs for BNILDI_01495 only