Conservation of cofitness between BNILDI_07200 and BNILDI_00050 in Escherichia coli ECRC62

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_07200 ytfF Inner membrane protein YtfF 1.0 BNILDI_00050 rclR DNA-binding transcriptional regulator RclR 0.62 6
Escherichia coli ECOR27 1.00 NOLOHH_04320 ytfF Inner membrane protein YtfF 0.99 NOLOHH_01925 rclR DNA-binding transcriptional regulator RclR low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03823 Inner membrane protein YtfF 0.99 OHPLBJKB_03377 RCS-specific HTH-type transcriptional activator RclR low > 73
Escherichia coli Nissle 1917 0.99 ECOLIN_RS24460 DMT family transporter 0.99 ECOLIN_RS01995 reactive chlorine-specific transcriptional regulator RclR low > 55
Escherichia coli BL21 0.99 ECD_04082 DMT transporter family inner membrane protein 0.99 ECD_00261 reactive chlorine species (RCS)-specific activator of the rcl genes low > 61
Escherichia coli ECRC102 0.99 NIAGMN_09910 ytfF Inner membrane protein YtfF 0.99 NIAGMN_07175 rclR DNA-binding transcriptional regulator RclR — —
Escherichia coli ECRC98 0.99 JDDGAC_15700 ytfF Inner membrane protein YtfF 0.99 JDDGAC_12760 rclR DNA-binding transcriptional regulator RclR low > 86
Escherichia coli ECRC100 0.99 OKFHMN_12060 ytfF Inner membrane protein YtfF 0.99 OKFHMN_09110 rclR DNA-binding transcriptional regulator RclR low > 80
Escherichia coli ECRC101 0.99 MCAODC_02575 ytfF Inner membrane protein YtfF 0.99 MCAODC_28335 rclR DNA-binding transcriptional regulator RclR low > 87
Escherichia coli ECRC99 0.99 KEDOAH_16095 ytfF Inner membrane protein YtfF 0.99 KEDOAH_18855 rclR DNA-binding transcriptional regulator RclR — —
Escherichia fergusonii Becca 0.99 EFB2_04318 Inner membrane protein YtfF 0.99 EFB2_03735 RCS-specific HTH-type transcriptional activator RclR low > 86
Escherichia coli ECOR38 0.99 HEPCGN_10255 ytfF Inner membrane protein YtfF 0.99 HEPCGN_07635 rclR DNA-binding transcriptional regulator RclR low > 87
Escherichia coli BW25113 0.99 b4210 ytfF predicted inner membrane protein (RefSeq) 0.99 b0305 ykgD predicted DNA-binding transcriptional regulator (NCBI) low > 76
Enterobacter sp. TBS_079 0.84 MPMX20_00487 Inner membrane protein YtfF 0.17 MPMX20_02690 RCS-specific HTH-type transcriptional activator RclR low > 85
Enterobacter asburiae PDN3 0.83 EX28DRAFT_3394 Permeases of the drug/metabolite transporter (DMT) superfamily 0.16 EX28DRAFT_0775 AraC-type DNA-binding domain-containing proteins low > 76
Klebsiella michiganensis M5al 0.82 BWI76_RS02710 EamA family transporter 0.16 BWI76_RS14965 AraC family transcriptional regulator low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF863 Putative membrane protein 0.70 GFF4466 Putative HTH-type transcriptional regulator ykgD low > 78
Pectobacterium carotovorum WPP14 0.64 HER17_RS14160 DMT family transporter 0.17 HER17_RS16840 AraC family transcriptional regulator low > 75
Pantoea sp. MT58 0.61 IAI47_17795 DMT family transporter 0.17 IAI47_17685 AraC family transcriptional regulator low > 76
Dyella japonica UNC79MFTsu3.2 0.57 ABZR86_RS22180 DMT family transporter 0.24 ABZR86_RS00310 AraC family transcriptional regulator low > 74
Pseudomonas sp. S08-1 0.57 OH686_10685 Inner membrane protein YtfF 0.16 OH686_18570 Transcriptional regulator, AraC family low > 80
Paraburkholderia sabiae LMG 24235 0.24 QEN71_RS06535 DMT family transporter 0.22 QEN71_RS10415 AraC family transcriptional regulator — —
Herbaspirillum seropedicae SmR1 0.22 HSERO_RS06235 multidrug DMT transporter permease 0.21 HSERO_RS00860 AraC family transcriptional regulator low > 78
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS11960 DMT family transporter 0.23 ABZR87_RS13575 AraC family transcriptional regulator low > 80
Agrobacterium fabrum C58 0.22 Atu1437 hypothetical protein 0.18 Atu3227 AraC family transcriptional regulator low > 89
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS12025 multidrug DMT transporter permease 0.24 BPHYT_RS27080 AraC family transcriptional regulator — —
Cupriavidus basilensis FW507-4G11 0.21 RR42_RS11755 multidrug DMT transporter permease 0.24 RR42_RS27175 AraC family transcriptional regulator low > 128
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS00510 EamA/RhaT family transporter 0.22 RALBFv3_RS01750 AraC family transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.20 UW163_RS13840 EamA/RhaT family transporter 0.22 UW163_RS15060 AraC family transcriptional regulator — —
Paraburkholderia bryophila 376MFSha3.1 0.20 H281DRAFT_00633 Permease of the drug/metabolite transporter (DMT) superfamily 0.20 H281DRAFT_01018 transcriptional regulator, AraC family low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF5206 Integral membrane protein 0.18 GFF4025 Transcriptional regulator, AraC family low > 90
Paraburkholderia graminis OAS925 0.19 ABIE53_002479 drug/metabolite transporter (DMT)-like permease 0.22 ABIE53_004382 AraC family transcriptional activator of mtrCDE low > 113
Dickeya dadantii 3937 0.18 DDA3937_RS08695 DMT family transporter 0.16 DDA3937_RS05590 AraC family transcriptional regulator low > 74
Rhizobium sp. OAE497 0.15 ABIE40_RS01500 DMT family transporter 0.22 ABIE40_RS25710 AraC family transcriptional regulator low > 107
Pseudomonas fluorescens SBW25 0.14 PFLU_RS16760 DMT family transporter 0.15 PFLU_RS11685 AraC family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.14 PFLU_RS16760 DMT family transporter 0.15 PFLU_RS11685 AraC family transcriptional regulator low > 109

Not shown: 10 genomes with orthologs for BNILDI_07200 only; 17 genomes with orthologs for BNILDI_00050 only