Conservation of cofitness between Atu3137 and Atu3142 in Agrobacterium fabrum C58

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3137 C4-dicarboxylate-binding protein 1.0 Atu3142 5-keto-4-deoxyuronate isomerase 0.57 6
Xanthobacter sp. DMC5 0.65 GFF2557 Solute-binding protein 0.50 GFF2560 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase — —
Bosea sp. OAE506 0.65 ABIE41_RS07830 TRAP transporter substrate-binding protein 0.50 ABIE41_RS07845 5-dehydro-4-deoxy-D-glucuronate isomerase 0.28 29
Azospirillum sp. SherDot2 0.59 MPMX19_05801 Solute-binding protein 0.50 MPMX19_05788 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase low > 112
Azospirillum brasilense Sp245 0.58 AZOBR_RS30130 C4-dicarboxylate ABC transporter 0.48 AZOBR_RS30225 5-keto-4-deoxyuronate isomerase 0.20 86
Sinorhizobium meliloti 1021 0.58 SM_b21353 periplasmic C4-dicarboxylate transport protein 0.53 SMa0214 5-keto-4-deoxyuronate isomerase low > 103
Caulobacter crescentus NA1000 Δfur 0.48 CCNA_01513 C4-dicarboxylate-binding protein 0.46 CCNA_01558 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase low > 67
Caulobacter crescentus NA1000 0.48 CCNA_01513 C4-dicarboxylate-binding protein 0.46 CCNA_01558 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase low > 66
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS24175 C4-dicarboxylate ABC transporter 0.46 BPHYT_RS10940 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase low > 109
Paraburkholderia graminis OAS925 0.47 ABIE53_006502 tripartite ATP-independent transporter DctP family solute receptor 0.47 ABIE53_002284 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_05324 tripartite ATP-independent transporter solute receptor, DctP family 0.46 H281DRAFT_01158 4-deoxy-L-threo-5-hexulose uronate isomerase low > 103
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS21090 TRAP transporter substrate-binding protein 0.45 ABZR87_RS20815 5-dehydro-4-deoxy-D-glucuronate isomerase low > 80
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.201.1 TRAP-type C4-dicarboxylate transport system, periplasmic component 0.45 Xcc-8004.206.1 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) low > 74
Lysobacter sp. OAE881 0.40 ABIE51_RS02850 TRAP transporter substrate-binding protein 0.45 ABIE51_RS02830 5-dehydro-4-deoxy-D-glucuronate isomerase low > 62
Pantoea agglomerans CFBP13505 P0401 0.38 PagCFBP13505_RS16465 TRAP transporter substrate-binding protein 0.47 PagCFBP13505_RS17575 5-dehydro-4-deoxy-D-glucuronate isomerase low > 74
Pantoea sp. MT58 0.38 IAI47_03230 TRAP transporter substrate-binding protein 0.46 IAI47_11015 5-dehydro-4-deoxy-D-glucuronate isomerase low > 76
Rahnella sp. WP5 0.36 EX31_RS08010 TRAP transporter substrate-binding protein 0.47 EX31_RS14105 5-dehydro-4-deoxy-D-glucuronate isomerase low > 89
Enterobacter sp. TBS_079 0.36 MPMX20_04349 Solute-binding protein 0.46 MPMX20_03716 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase low > 85
Pectobacterium carotovorum WPP14 0.35 HER17_RS19675 TRAP transporter substrate-binding protein 0.43 HER17_RS01600 5-dehydro-4-deoxy-D-glucuronate isomerase low > 75
Alteromonas macleodii MIT1002 0.34 MIT1002_02426 Extracytoplasmic solute receptor protein YiaO 0.50 MIT1002_02425 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase low > 70
Echinicola vietnamensis KMM 6221, DSM 17526 0.34 Echvi_3629 tripartite ATP-independent periplasmic transporter solute receptor, DctP family 0.47 Echvi_4006 5-keto 4-deoxyuronate isomerase low > 79
Escherichia coli ECOR38 0.33 HEPCGN_18535 Bacterial extracellular solute-binding protein, family 7 0.46 HEPCGN_19590 kduI 5-dehydro-4-deoxy-D-glucuronate isomerase low > 88
Escherichia coli ECOR27 0.33 NOLOHH_11100 Bacterial extracellular solute-binding protein, family 7 0.46 NOLOHH_11805 kduI 5-dehydro-4-deoxy-D-glucuronate isomerase low > 76
Escherichia coli ECRC62 0.33 BNILDI_07130 Bacterial extracellular solute-binding protein, family 7 0.46 BNILDI_10285 kduI 5-dehydro-4-deoxy-D-glucuronate isomerase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF3130 TRAP-type C4-dicarboxylate transport system, periplasmic component 0.46 GFF1328 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) 0.35 58
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_03838 Solute-binding protein 0.45 OHPLBJKB_00886 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase low > 74
Escherichia coli Nissle 1917 0.32 ECOLIN_RS17380 TRAP transporter substrate-binding protein 0.46 ECOLIN_RS15955 5-dehydro-4-deoxy-D-glucuronate isomerase low > 55
Cellulophaga baltica 18 0.32 M666_RS19720 TRAP transporter substrate-binding protein 0.50 M666_RS19745 5-dehydro-4-deoxy-D-glucuronate isomerase low > 67

Not shown: 24 genomes with orthologs for Atu3137 only; 25 genomes with orthologs for Atu3142 only