Conservation of cofitness between Atu3075 and Atu2238 in Agrobacterium fabrum C58

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3075 TetR family transcriptional regulator 1.0 Atu2238 ubiquinol-cytochrome c reductase cytochrome b subunit 0.35 16
Azospirillum brasilense Sp245 0.33 AZOBR_RS02040 TetR family transcriptional regulator 0.59 AZOBR_RS20750 cytochrome B low > 97
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS15890 TetR/AcrR family transcriptional regulator 0.34 ABZR86_RS01575 cytochrome bc complex cytochrome b subunit low > 74
Sinorhizobium meliloti 1021 0.31 SM_b20455 transcriptional regulator 0.92 SMc00188 cytochrome B transmembrane protein low > 103
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_01426 transcriptional regulator, TetR family 0.40 H281DRAFT_05670 ubiquinol-cytochrome c reductase cytochrome b subunit — —
Shewanella sp. ANA-3 0.29 Shewana3_1076 TetR family transcriptional regulator (RefSeq) 0.38 Shewana3_0602 cytochrome b/b6 domain-containing protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.29 SO3494 transcriptional regulator, TetR family (NCBI ptt file) 0.38 SO0609 petB ubiquinol-cytochrome c reductase, cytochrome b (NCBI ptt file) — —
Paraburkholderia graminis OAS925 0.28 ABIE53_002226 AcrR family transcriptional regulator 0.38 ABIE53_003684 ubiquinol-cytochrome c reductase cytochrome b subunit low > 113
Variovorax sp. OAS795 0.28 ABID97_RS26150 TetR/AcrR family transcriptional regulator 0.39 ABID97_RS22980 cytochrome bc complex cytochrome b subunit 0.52 13
Sphingomonas koreensis DSMZ 15582 0.27 Ga0059261_1853 transcriptional regulator, TetR family 0.62 Ga0059261_3220 Cytochrome b subunit of the bc complex — —
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS27625 TetR family transcriptional regulator 0.40 RR42_RS18820 cytochrome B low > 128
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS15475 TetR/AcrR family transcriptional regulator 0.38 PFLU_RS04200 cytochrome bc complex cytochrome b subunit low > 109
Pseudomonas fluorescens SBW25 0.26 PFLU_RS15475 TetR/AcrR family transcriptional regulator 0.38 PFLU_RS04200 cytochrome bc complex cytochrome b subunit low > 109
Rhizobium sp. OAE497 0.26 ABIE40_RS21315 TetR/AcrR family transcriptional regulator 0.91 ABIE40_RS13125 cytochrome b N-terminal domain-containing protein low > 107
Herbaspirillum seropedicae SmR1 0.25 HSERO_RS21650 TetR family transcriptional regulator 0.39 HSERO_RS20240 cytochrome B low > 78
Pseudomonas simiae WCS417 0.23 PS417_19005 TetR family transcriptional regulator 0.38 PS417_04160 cytochrome B — —
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS09555 TetR/AcrR family transcriptional regulator 0.39 QEN71_RS27780 cytochrome bc complex cytochrome b subunit — —
Bosea sp. OAE506 0.22 ABIE41_RS18905 TetR/AcrR family transcriptional regulator 0.65 ABIE41_RS11195 cytochrome b/b6 low > 77
Azospirillum sp. SherDot2 0.18 MPMX19_05796 HTH-type transcriptional repressor BdcR 0.61 MPMX19_05013 Cytochrome b low > 112
Shewanella loihica PV-4 0.17 Shew_3099 TetR family transcriptional regulator (RefSeq) 0.38 Shew_0571 cytochrome b/b6 domain-containing protein (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.16 MIT1002_01484 Copper outer membrane regulator 0.39 MIT1002_00815 Cytochrome b/c1 low > 70
Caulobacter crescentus NA1000 Δfur 0.11 CCNA_00769 TetR family transcriptional regulator 0.65 CCNA_00506 cytochrome b low > 67
Caulobacter crescentus NA1000 0.11 CCNA_00769 TetR family transcriptional regulator 0.65 CCNA_00506 cytochrome b low > 66

Not shown: 25 genomes with orthologs for Atu3075 only; 33 genomes with orthologs for Atu2238 only