Conservation of cofitness between Atu3414 and Atu1364 in Agrobacterium fabrum C58

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3414 AgaE protein 1.0 Atu1364 ATP-dependent Clp protease, ATP-binding subunit 0.16 18
Sinorhizobium meliloti 1021 0.75 SMa1869 deaminase 0.82 SMc02109 ATP-dependent Clp protease ATP-binding subunit protein — —
Ralstonia sp. UNC404CL21Col 0.73 ABZR87_RS21570 FAD-binding oxidoreductase 0.53 ABZR87_RS00435 ATP-dependent Clp protease ATP-binding subunit ClpA low > 80
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_26780 D-amino acid oxidase 0.52 AO356_22150 ATP-dependent Clp protease ATP-binding subunit ClpA low > 104
Variovorax sp. OAS795 0.72 ABID97_RS28570 FAD-binding oxidoreductase 0.52 ABID97_RS16910 ATP-dependent Clp protease ATP-binding subunit ClpA low > 91
Pseudomonas syringae pv. syringae B728a 0.71 Psyr_2637 FAD dependent oxidoreductase 0.52 Psyr_3183 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.71 Psyr_2637 FAD dependent oxidoreductase 0.52 Psyr_3183 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS27400 D-amino acid oxidase 0.53 BPHYT_RS15710 ATP-dependent Clp protease ATP-binding protein — —
Herbaspirillum seropedicae SmR1 0.70 HSERO_RS05695 D-amino acid oxidase 0.54 HSERO_RS07030 ATP-dependent Clp protease ATP-binding protein — —
Paraburkholderia bryophila 376MFSha3.1 0.69 H281DRAFT_06514 Glycine/D-amino acid oxidase (deaminating) 0.53 H281DRAFT_04082 ATP-dependent Clp protease ATP-binding subunit ClpA low > 103
Azospirillum sp. SherDot2 0.69 MPMX19_06790 D-amino acid dehydrogenase 0.67 MPMX19_00503 ATP-dependent Clp protease ATP-binding subunit ClpA low > 112
Pseudomonas fluorescens FW300-N1B4 0.16 Pf1N1B4_3969 Sarcosine oxidase beta subunit (EC 1.5.3.1) 0.52 Pf1N1B4_4055 ATP-dependent Clp protease ATP-binding subunit ClpA low > 87
Pseudomonas fluorescens FW300-N2E2 0.14 Pf6N2E2_352 Opine oxidase subunit B 0.52 Pf6N2E2_292 ATP-dependent Clp protease ATP-binding subunit ClpA low > 103
Ralstonia solanacearum UW163 0.13 UW163_RS20260 FAD-binding oxidoreductase 0.53 UW163_RS08860 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Ralstonia solanacearum IBSBF1503 0.13 RALBFv3_RS18870 FAD-binding oxidoreductase 0.53 RALBFv3_RS04810 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Variovorax sp. SCN45 0.12 GFF5036 Opine oxidase subunit B 0.52 GFF341 ATP-dependent Clp protease ATP-binding subunit ClpA 0.36 114
Pseudomonas stutzeri RCH2 0.12 Psest_3368 glycine oxidase ThiO 0.53 Psest_2027 ATP-dependent Clp protease ATP-binding subunit clpA low > 67
Dyella japonica UNC79MFTsu3.2 0.12 ABZR86_RS20475 FAD-dependent oxidoreductase 0.54 ABZR86_RS02200 ATP-dependent Clp protease ATP-binding subunit ClpA low > 74
Pseudomonas sp. RS175 0.11 PFR28_01243 4-methylaminobutanoate oxidase (formaldehyde-forming) 0.53 PFR28_02613 ATP-dependent Clp protease ATP-binding subunit ClpA low > 88
Acidovorax sp. GW101-3H11 0.11 Ac3H11_4171 D-amino-acid oxidase (EC 1.4.3.3) 0.52 Ac3H11_2456 ATP-dependent Clp protease ATP-binding subunit ClpA low > 79
Pseudomonas putida KT2440 0.11 PP_0612 FAD-dependent glycine/D-amino acid oxidase 0.52 PP_4008 ATP-dependent serine protease low > 96
Pseudomonas fluorescens GW456-L13 0.10 PfGW456L13_1488 Glycine oxidase ThiO (EC 1.4.3.19) 0.52 PfGW456L13_2646 ATP-dependent Clp protease ATP-binding subunit ClpA low > 87
Serratia liquefaciens MT49 0.08 IAI46_09165 FAD-dependent oxidoreductase 0.51 IAI46_08515 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86

Not shown: 0 genomes with orthologs for Atu3414 only; 66 genomes with orthologs for Atu1364 only