| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens FW300-N2E3 | 1.0 | AO353_10245 | | GDP-mannose 4,6-dehydratase | 1.0 | AO353_21830 | | chemotaxis protein CheY | 0.31 | 9 |
| Pseudomonas fluorescens GW456-L13 | 0.94 | PfGW456L13_2338 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.98 | PfGW456L13_2885 | | BarA-associated response regulator UvrY (= GacA = SirA) | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.93 | Pf1N1B4_1965 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.99 | Pf1N1B4_5619 | | BarA-associated response regulator UvrY (= GacA = SirA) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.92 | AO356_11835 | | GDP-mannose 4,6-dehydratase | 0.99 | AO356_00355 | | chemotaxis protein CheY | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.91 | Pf6N2E2_4242 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.99 | Pf6N2E2_2022 | | BarA-associated response regulator UvrY (= GacA = SirA) | low | > 103 |
| Pseudomonas sp. RS175 | 0.91 | PFR28_04554 | | GDP-mannose 4,6-dehydratase | 0.99 | PFR28_01410 | | Response regulator GacA | low | > 88 |
| Pseudomonas sp. S08-1 | 0.83 | OH686_11980 | | GDP-mannose 4,6-dehydratase | 0.87 | OH686_00335 | | BarA-associated response regulator UvrY ( GacA SirA) | low | > 80 |
| Pseudomonas putida KT2440 | 0.57 | PP_1799 | | GDP-mannose 4,6-dehydratase | 0.91 | PP_4099 | | two-componenent system BarA/UvrY - regulatory subunit | 0.40 | 73 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.57 | Xcc-8004.4503.1 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.42 | Xcc-8004.2612.1 | | BarA-associated response regulator UvrY (= GacA = SirA) | low | > 74 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.57 | Psyr_0916 | | GDP-mannose 4,6-dehydratase | 0.94 | Psyr_2897 | | regulatory protein, LuxR:Response regulator receiver | low | > 86 |
| Rhodanobacter sp. FW510-T8 | 0.57 | OKGIIK_01210 | gmd | GDP-mannose 4,6-dehydratase | 0.44 | OKGIIK_07415 | | DNA-binding response regulator | low | > 52 |
| Pseudomonas syringae pv. syringae B728a | 0.57 | Psyr_0916 | | GDP-mannose 4,6-dehydratase | 0.94 | Psyr_2897 | | regulatory protein, LuxR:Response regulator receiver | low | > 86 |
| Enterobacter sp. TBS_079 | 0.50 | MPMX20_03035 | | GDP-mannose 4,6-dehydratase | 0.58 | MPMX20_02839 | | Response regulator UvrY | low | > 85 |
| Pseudomonas fluorescens SBW25 | 0.50 | PFLU_RS17890 | | GDP-mannose 4,6-dehydratase | 0.95 | PFLU_RS10765 | | UvrY/SirA/GacA family response regulator transcription factor | 0.45 | 49 |
| Pseudomonas fluorescens SBW25-INTG | 0.50 | PFLU_RS17890 | | GDP-mannose 4,6-dehydratase | 0.95 | PFLU_RS10765 | | UvrY/SirA/GacA family response regulator transcription factor | low | > 109 |
| Enterobacter asburiae PDN3 | 0.50 | EX28DRAFT_0502 | | GDP-mannose 4,6-dehydratase | 0.58 | EX28DRAFT_0633 | | two component transcriptional regulator, LuxR family | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.49 | GFF3875 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.58 | GFF1699 | | BarA-associated response regulator UvrY (= GacA = SirA) | low | > 78 |
| Escherichia coli ECRC98 | 0.49 | JDDGAC_28550 | | GDP-mannose 4,6-dehydratase | 0.58 | JDDGAC_00410 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli ECRC102 | 0.49 | NIAGMN_22385 | | GDP-mannose 4,6-dehydratase | 0.58 | NIAGMN_02230 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli ECRC101 | 0.49 | MCAODC_20500 | | GDP-mannose 4,6-dehydratase | 0.58 | MCAODC_19570 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli ECRC99 | 0.49 | KEDOAH_03710 | | GDP-mannose 4,6-dehydratase | 0.58 | KEDOAH_02270 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli ECRC100 | 0.49 | OKFHMN_24440 | | GDP-mannose 4,6-dehydratase | 0.58 | OKFHMN_25820 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia fergusonii Becca | 0.49 | EFB2_01801 | | GDP-mannose 4,6-dehydratase | 0.58 | EFB2_02032 | | Response regulator UvrY | 0.52 | 54 |
| Escherichia coli ECOR38 | 0.49 | HEPCGN_03045 | | GDP-mannose 4,6-dehydratase | 0.58 | HEPCGN_04175 | uvrC | excinuclease ABC subunit UvrC | low | > 87 |
| Escherichia coli ECOR27 | 0.49 | NOLOHH_15675 | | GDP-mannose 4,6-dehydratase | 0.58 | NOLOHH_16440 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | low | > 75 |
| Escherichia coli BL21 | 0.49 | ECD_01959 | | GDP-D-mannose dehydratase, NAD(P)-binding | 0.53 | ECD_01879 | | response regulator in two-component regulatory system with BarA | low | > 61 |
| Escherichia coli BW25113 | 0.49 | b2053 | gmd | GDP-D-mannose dehydratase, NAD(P)-binding (NCBI) | 0.58 | b1914 | uvrY | response regulator (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.49 | BNILDI_14585 | | GDP-mannose 4,6-dehydratase | 0.58 | BNILDI_15230 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | low | > 75 |
| Dickeya dadantii 3937 | 0.49 | DDA3937_RS18665 | | GDP-mannose 4,6-dehydratase | 0.58 | DDA3937_RS13705 | | UvrY/SirA/GacA family response regulator transcription factor | low | > 74 |
| Escherichia coli Nissle 1917 | 0.49 | ECOLIN_RS12095 | | GDP-mannose 4,6-dehydratase | 0.58 | ECOLIN_RS10900 | | UvrY/SirA/GacA family response regulator transcription factor | — | — |
| Pectobacterium carotovorum WPP14 | 0.49 | HER17_RS14540 | | GDP-mannose 4,6-dehydratase | 0.58 | HER17_RS07710 | | UvrY/SirA/GacA family response regulator transcription factor | low | > 75 |
| Vibrio cholerae E7946 ATCC 55056 | 0.48 | CSW01_01280 | | GDP-mannose 4,6-dehydratase | 0.65 | CSW01_06135 | | two-component system response regulator UvrY | — | — |
| Dickeya dianthicola ME23 | 0.48 | DZA65_RS19730 | | GDP-mannose 4,6-dehydratase | 0.58 | DZA65_RS14290 | | UvrY/SirA/GacA family response regulator transcription factor | low | > 75 |
| Dickeya dianthicola 67-19 | 0.48 | HGI48_RS18595 | | GDP-mannose 4,6-dehydratase | 0.58 | HGI48_RS13800 | | UvrY/SirA/GacA family response regulator transcription factor | low | > 71 |
| Pseudomonas stutzeri RCH2 | 0.48 | Psest_1818 | | GDP-mannose 4,6-dehydratase | 0.88 | Psest_2260 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | low | > 67 |
| Rhodanobacter denitrificans MT42 | 0.47 | LRK55_RS03650 | | GDP-mannose 4,6-dehydratase | 0.44 | LRK55_RS17740 | | response regulator | low | > 63 |
| Rahnella sp. WP5 | 0.35 | EX31_RS02865 | | GDP-mannose 4,6-dehydratase | 0.60 | EX31_RS24145 | | UvrY/SirA/GacA family response regulator transcription factor | low | > 89 |
Not shown: 36 genomes with orthologs for AO353_10245 only; 17 genomes with orthologs for AO353_21830 only