Conservation of cofitness between AMB_RS10130 and AMB_RS11175 in Magnetospirillum magneticum AMB-1

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Magnetospirillum magneticum AMB-1 1.0 AMB_RS10130 sulfate ABC transporter permease subunit CysT 1.0 AMB_RS11175 murein L,D-transpeptidase 0.83 3
Castellaniella sp019104865 MT123 0.66 ABCV34_RS03940 sulfate ABC transporter permease subunit CysT 0.19 ABCV34_RS14875 L,D-transpeptidase family protein low > 48
Cupriavidus basilensis FW507-4G11 0.62 RR42_RS12260 sulfate transporter 0.22 RR42_RS09545 peptidase low > 128
Rhodanobacter sp. FW510-T8 0.58 OKGIIK_10930 cysT sulfate ABC transporter permease subunit CysT 0.23 OKGIIK_00395 Peptidoglycan-binding protein low > 52
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_11545 sulfate ABC transporter permease 0.21 AO353_29055 peptidoglycan-binding protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_10680 sulfate ABC transporter permease 0.21 AO356_26185 peptidoglycan-binding protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_1726 Sulfate transport system permease protein CysT 0.23 Pf1N1B4_42 hypothetical protein low > 87
Pseudomonas fluorescens SBW25 0.57 PFLU_RS00950 sulfate ABC transporter permease subunit CysT 0.21 PFLU_RS17345 L,D-transpeptidase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS00950 sulfate ABC transporter permease subunit CysT 0.21 PFLU_RS17345 L,D-transpeptidase family protein low > 109
Pseudomonas simiae WCS417 0.57 PS417_00935 sulfate ABC transporter permease 0.21 PS417_15375 peptidoglycan-binding protein low > 88
Pseudomonas sp. RS175 0.56 PFR28_04763 Sulfate transport system permease protein CysT 0.21 PFR28_01849 hypothetical protein low > 88
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_485 Sulfate transport system permease protein CysT 0.22 PfGW456L13_3972 hypothetical protein low > 87
Shewanella oneidensis MR-1 0.55 SO4653 cysT-2 sulfate ABC transporter, permease protein (NCBI ptt file) 0.22 SO1899 conserved hypothetical protein (NCBI ptt file) low > 76
Pseudomonas stutzeri RCH2 0.53 Psest_4061 sulfate ABC transporter, permease protein CysT 0.19 Psest_4007 Uncharacterized protein conserved in bacteria low > 67
Marinobacter adhaerens HP15 0.52 HP15_1345 sulphate ABC transporter, permease protein CysT 0.25 HP15_2647 peptidoglycan-binding domain 1 protein low > 73
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_4004 Sulfate transport system permease protein CysT 0.21 Pf6N2E2_1111 cell wall degradation protein low > 103
Shewanella sp. ANA-3 0.47 Shewana3_3190 sulfate ABC transporter, inner membrane subunit CysT (RefSeq) 0.21 Shewana3_1674 peptidoglycan binding domain-containing protein (RefSeq) low > 73
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_01299 Sulfate transport system permease protein CysT 0.19 OHPLBJKB_02742 hypothetical protein low > 73
Escherichia coli BL21 0.44 ECD_02324 sulfate/thiosulfate ABC transporter permease 0.19 ECD_00929 murein L,D-transpeptidase low > 61
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_02855 sulfate/thiosulfate ABC transporter permease CysT 0.19 CSW01_06405 murein L,D-transpeptidase low > 62
Escherichia coli ECOR27 0.43 NOLOHH_13835 cysT sulfate/thiosulfate ABC transporter permease CysT 0.19 NOLOHH_21960 ldtD L,D-transpeptidase low > 75
Escherichia coli ECOR38 0.43 HEPCGN_21330 cysT sulfate/thiosulfate ABC transporter permease CysT 0.18 HEPCGN_23125 ldtD L,D-transpeptidase low > 87
Escherichia coli ECRC62 0.43 BNILDI_12700 cysT sulfate/thiosulfate ABC transporter permease CysT 0.19 BNILDI_20215 ldtD L,D-transpeptidase low > 75
Escherichia coli BW25113 0.43 b2424 cysU sulfate/thiosulfate transporter subunit (NCBI) 0.19 b0925 ycbB predicted carboxypeptidase (NCBI) low > 76
Escherichia coli ECRC102 0.43 NIAGMN_19925 cysT sulfate/thiosulfate ABC transporter permease CysT 0.19 NIAGMN_03120 ldtD L,D-transpeptidase
Escherichia coli ECRC101 0.43 MCAODC_12685 cysT sulfate/thiosulfate ABC transporter permease CysT 0.19 MCAODC_24790 ldtD L,D-transpeptidase low > 87
Escherichia fergusonii Becca 0.43 EFB2_01453 Sulfate transport system permease protein CysT 0.19 EFB2_03139 putative L,D-transpeptidase YcbB low > 86
Escherichia coli ECRC100 0.43 OKFHMN_22155 cysT sulfate/thiosulfate ABC transporter permease CysT 0.19 OKFHMN_05400 ldtD L,D-transpeptidase low > 80
Escherichia coli ECRC99 0.43 KEDOAH_06065 cysT sulfate/thiosulfate ABC transporter permease CysT 0.19 KEDOAH_22335 ldtD L,D-transpeptidase
Escherichia coli ECRC98 0.43 JDDGAC_26105 cysT sulfate/thiosulfate ABC transporter permease CysT 0.19 JDDGAC_09010 ldtD L,D-transpeptidase low > 86
Escherichia coli Nissle 1917 0.42 ECOLIN_RS13915 sulfate/thiosulfate ABC transporter permease CysT 0.19 ECOLIN_RS04895 L,D-transpeptidase low > 55

Not shown: 48 genomes with orthologs for AMB_RS10130 only; 7 genomes with orthologs for AMB_RS11175 only