Conservation of cofitness between DvMF_1421 and DvMF_1000 in Desulfovibrio vulgaris Miyazaki F

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Desulfovibrio vulgaris Miyazaki F 1.0 DvMF_1421 thioesterase superfamily protein (RefSeq) 1.0 DvMF_1000 biotin/acetyl-CoA-carboxylase ligase (RefSeq) 0.27 16
Desulfovibrio vulgaris Hildenborough JW710 0.84 DVU0886 thioesterase family protein (TIGR) 0.54 DVU2557 birA birA bifunctional protein (TIGR) low > 55
Pseudomonas sp. S08-1 0.30 OH686_19140 tol-pal system-associated acyl-CoA thioesterase 0.14 OH686_15250 Biotin operon repressor / Biotin--protein ligase — —
Pseudomonas putida KT2440 0.29 PP_1218 putative acyl-CoA thioesterase 0.18 PP_0437 bifunctional biotin-[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Pseudomonas stutzeri RCH2 0.29 Psest_1498 tol-pal system-associated acyl-CoA thioesterase 0.18 Psest_3628 birA, biotin-[acetyl-CoA-carboxylase] ligase region — —
Erwinia tracheiphila SCR3 0.28 LU632_RS16050 ybgC tol-pal system-associated acyl-CoA thioesterase 0.19 LU632_RS19510 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Pseudomonas simiae WCS417 0.28 PS417_22440 4-hydroxybenzoyl-CoA thioesterase 0.19 PS417_25635 biotin--protein ligase — —
Pantoea sp. MT58 0.28 IAI47_13705 tol-pal system-associated acyl-CoA thioesterase 0.20 IAI47_18175 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Kangiella aquimarina DSM 16071 0.27 B158DRAFT_1137 tol-pal system-associated acyl-CoA thioesterase 0.16 B158DRAFT_1855 birA, biotin-[acetyl-CoA-carboxylase] ligase region — —
Dickeya dadantii 3937 0.26 DDA3937_RS06495 tol-pal system-associated acyl-CoA thioesterase 0.20 DDA3937_RS01030 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Rahnella sp. WP5 0.25 EX31_RS23475 tol-pal system-associated acyl-CoA thioesterase 0.18 EX31_RS17135 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Pectobacterium carotovorum WPP14 0.25 HER17_RS14885 tol-pal system-associated acyl-CoA thioesterase 0.20 HER17_RS20500 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Dickeya dianthicola 67-19 0.24 HGI48_RS06540 tol-pal system-associated acyl-CoA thioesterase 0.20 HGI48_RS01025 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Dickeya dianthicola ME23 0.24 DZA65_RS06890 tol-pal system-associated acyl-CoA thioesterase 0.19 DZA65_RS01090 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Serratia liquefaciens MT49 0.24 IAI46_06315 tol-pal system-associated acyl-CoA thioesterase 0.18 IAI46_01185 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Shewanella amazonensis SB2B 0.24 Sama_2090 hypothetical protein (RefSeq) 0.18 Sama_0197 biotin--protein ligase (RefSeq) — —
Escherichia fergusonii Becca 0.23 EFB2_03370 Acyl-CoA thioester hydrolase YbgC 0.19 EFB2_04637 Bifunctional ligase/repressor BirA — —
Escherichia coli BW25113 0.23 b0736 ybgC predicted acyl-CoA thioesterase (NCBI) 0.19 b3973 birA biotin--protein ligase (NCBI) low > 76
Escherichia coli ECRC62 0.23 BNILDI_21255 ybgC tol-pal system-associated acyl-CoA thioesterase 0.19 BNILDI_05890 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Escherichia coli Nissle 1917 0.23 ECOLIN_RS03920 tol-pal system-associated acyl-CoA thioesterase 0.19 ECOLIN_RS22935 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Escherichia coli ECRC101 0.23 OKFHMN_06825 ybgC tol-pal system-associated acyl-CoA thioesterase 0.19 OKFHMN_13490 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Escherichia coli ECRC98 0.23 JDDGAC_10480 ybgC tol-pal system-associated acyl-CoA thioesterase 0.19 JDDGAC_17115 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Escherichia coli ECRC99 0.23 KEDOAH_21140 ybgC tol-pal system-associated acyl-CoA thioesterase 0.19 KEDOAH_14670 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Escherichia coli ECOR27 0.23 NOLOHH_23260 ybgC tol-pal system-associated acyl-CoA thioesterase 0.19 NOLOHH_05635 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Escherichia coli ECRC102 0.23 NIAGMN_04875 ybgC tol-pal system-associated acyl-CoA thioesterase 0.19 NIAGMN_11240 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Escherichia coli BL21 0.23 ECD_00696 acyl-CoA thioester hydrolase 0.19 ECD_03854 bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase/ DNA-binding transcriptional repressor, bio-5'-AMP-binding — —
Escherichia coli ECRC101 0.23 MCAODC_26045 ybgC tol-pal system-associated acyl-CoA thioesterase 0.19 MCAODC_03990 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Escherichia coli ECOR38 0.23 HEPCGN_01445 ybgC tol-pal system-associated acyl-CoA thioesterase 0.19 HEPCGN_12140 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_02977 Acyl-CoA thioester hydrolase YbgC 0.19 OHPLBJKB_04077 Bifunctional ligase/repressor BirA — —
Shewanella loihica PV-4 0.23 Shew_1523 4-hydroxybenzoyl-CoA thioesterase (RefSeq) 0.17 Shew_0142 biotin--protein ligase (RefSeq) — —
Lysobacter sp. OAE881 0.22 ABIE51_RS05060 tol-pal system-associated acyl-CoA thioesterase 0.12 ABIE51_RS03960 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA low > 62
Rhodospirillum rubrum S1H 0.22 Rru_A1090 4-hydroxybenzoyl-CoA thioesterase (NCBI) 0.24 Rru_A1321 Biotin--acetyl-CoA-carboxylase ligase (NCBI) — —
Enterobacter asburiae PDN3 0.22 EX28DRAFT_2255 tol-pal system-associated acyl-CoA thioesterase 0.20 EX28DRAFT_4037 birA, biotin-[acetyl-CoA-carboxylase] ligase region/BirA biotin operon repressor domain — —
Rhodanobacter sp. FW510-T8 0.21 OKGIIK_01855 ybgC tol-pal system-associated acyl-CoA thioesterase 0.13 OKGIIK_00655 Bifunctional ligase/repressor BirA — —
Rhodanobacter denitrificans FW104-10B01 0.20 LRK54_RS04895 tol-pal system-associated acyl-CoA thioesterase 0.12 LRK54_RS05965 biotin--[acetyl-CoA-carboxylase] ligase — —
Rhodanobacter denitrificans MT42 0.20 LRK55_RS04675 tol-pal system-associated acyl-CoA thioesterase 0.14 LRK55_RS05720 biotin--[acetyl-CoA-carboxylase] ligase — —
Dyella japonica UNC79MFTsu3.2 0.20 ABZR86_RS10825 tol-pal system-associated acyl-CoA thioesterase 0.15 ABZR86_RS18380 biotin--[acetyl-CoA-carboxylase] ligase — —

Not shown: 25 genomes with orthologs for DvMF_1421 only; 19 genomes with orthologs for DvMF_1000 only