Conservation of cofitness between Shewana3_2281 and Shewana3_4035 in Shewanella sp. ANA-3

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella sp. ANA-3 1.0 Shewana3_2281 BadM/Rrf2 family transcriptional regulator (RefSeq) 1.0 Shewana3_4035 protoheme IX farnesyltransferase (RefSeq) 0.71 4
Shewanella loihica PV-4 0.94 Shew_2318 BadM/Rrf2 family transcriptional regulator (RefSeq) 0.75 Shew_0370 protoheme IX farnesyltransferase (RefSeq) — —
Pectobacterium carotovorum WPP14 0.70 HER17_RS06010 Fe-S cluster assembly transcriptional regulator IscR 0.58 HER17_RS15895 heme o synthase low > 75
Rahnella sp. WP5 0.68 EX31_RS20550 Fe-S cluster assembly transcriptional regulator IscR 0.59 EX31_RS22200 protoheme IX farnesyltransferase 0.75 47
Alteromonas macleodii MIT1002 0.68 MIT1002_02802 HTH-type transcriptional regulator IscR 0.68 MIT1002_03925 Protoheme IX farnesyltransferase low > 70
Erwinia tracheiphila SCR3 0.68 LU632_RS17875 iscR Fe-S cluster assembly transcriptional regulator IscR 0.57 LU632_RS18395 cyoE heme o synthase — —
Dickeya dadantii 3937 0.68 DDA3937_RS15550 Fe-S cluster assembly transcriptional regulator IscR 0.59 DDA3937_RS05595 protoheme IX farnesyltransferase — —
Serratia liquefaciens MT49 0.68 IAI46_19360 Fe-S cluster assembly transcriptional regulator IscR 0.57 IAI46_04965 protoheme IX farnesyltransferase low > 86
Dickeya dianthicola ME23 0.68 DZA65_RS16725 Fe-S cluster assembly transcriptional regulator IscR 0.58 DZA65_RS05965 protoheme IX farnesyltransferase low > 75
Dickeya dianthicola 67-19 0.68 HGI48_RS15650 Fe-S cluster assembly transcriptional regulator IscR 0.58 HGI48_RS05640 protoheme IX farnesyltransferase — —
Pantoea sp. MT58 0.67 IAI47_05000 Fe-S cluster assembly transcriptional regulator IscR 0.57 IAI47_14700 protoheme IX farnesyltransferase low > 76
Pseudomonas putida KT2440 0.66 PP_0841 DNA-binding transcriptional dual regulator 2Fe-2S cluster IscR 0.55 PP_0816 protoheme IX farnesyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_1236 transcriptional regulator, BadM/Rrf2 family 0.55 Psyr_1145 Protoheme IX farnesyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_1236 transcriptional regulator, BadM/Rrf2 family 0.55 Psyr_1145 Protoheme IX farnesyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS24860 Fe-S cluster assembly transcriptional regulator IscR 0.56 PFLU_RS25200 protoheme IX farnesyltransferase low > 109
Pseudomonas fluorescens SBW25 0.65 PFLU_RS24860 Fe-S cluster assembly transcriptional regulator IscR 0.56 PFLU_RS25200 protoheme IX farnesyltransferase low > 109
Pseudomonas simiae WCS417 0.65 PS417_23205 transcriptional regulator 0.56 PS417_23370 protoheme IX farnesyltransferase low > 88
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_15830 transcriptional regulator 0.55 AO353_15470 protoheme IX farnesyltransferase low > 101
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_06650 transcriptional regulator 0.56 AO356_16980 protoheme IX farnesyltransferase low > 104
Pseudomonas sp. RS175 0.64 PFR28_00285 HTH-type transcriptional regulator IscR 0.56 PFR28_00246 Protoheme IX farnesyltransferase low > 88
Klebsiella michiganensis M5al 0.59 BWI76_RS21165 Fe-S cluster assembly transcriptional regulator IscR 0.56 BWI76_RS06475 protoheme IX farnesyltransferase low > 92
Escherichia fergusonii Becca 0.59 EFB2_01359 HTH-type transcriptional regulator IscR 0.56 EFB2_03629 Protoheme IX farnesyltransferase low > 86
Escherichia coli BW25113 0.59 b2531 iscR DNA-binding transcriptional repressor (NCBI) 0.56 b0428 cyoE protoheme IX farnesyltransferase (NCBI) low > 76
Escherichia coli ECRC99 0.59 KEDOAH_06605 iscR Fe-S cluster assembly transcriptional regulator IscR 0.56 KEDOAH_19585 cyoE heme o synthase — —
Escherichia coli ECRC102 0.59 NIAGMN_19385 iscR Fe-S cluster assembly transcriptional regulator IscR 0.56 NIAGMN_06435 cyoE heme o synthase — —
Escherichia coli ECOR27 0.59 NOLOHH_13285 iscR Fe-S cluster assembly transcriptional regulator IscR 0.56 NOLOHH_01315 cyoE heme o synthase low > 75
Escherichia coli ECRC98 0.59 JDDGAC_25290 iscR Fe-S cluster assembly transcriptional regulator IscR 0.56 JDDGAC_12035 cyoE heme o synthase low > 86
Escherichia coli Nissle 1917 0.59 ECOLIN_RS14370 Fe-S cluster assembly transcriptional regulator IscR 0.56 ECOLIN_RS02575 heme o synthase low > 55
Escherichia coli ECOR38 0.59 HEPCGN_20755 iscR Fe-S cluster assembly transcriptional regulator IscR 0.56 HEPCGN_06995 cyoE heme o synthase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_01178 HTH-type transcriptional regulator IscR 0.56 OHPLBJKB_03245 Protoheme IX farnesyltransferase 0.61 19
Escherichia coli BL21 0.59 ECD_02423 isc operon transcriptional repressor; suf operon transcriptional activator; oxidative stress- and iron starvation-inducible; autorepressor 0.56 ECD_00379 protoheme IX farnesyltransferase low > 61
Escherichia coli ECRC101 0.59 MCAODC_12145 iscR Fe-S cluster assembly transcriptional regulator IscR 0.56 MCAODC_27605 cyoE heme o synthase low > 87
Escherichia coli ECRC100 0.59 OKFHMN_21615 iscR Fe-S cluster assembly transcriptional regulator IscR 0.56 OKFHMN_08380 cyoE heme o synthase low > 80
Escherichia coli ECRC62 0.59 BNILDI_12085 iscR Fe-S cluster assembly transcriptional regulator IscR 0.56 BNILDI_22730 cyoE heme o synthase low > 75
Enterobacter sp. TBS_079 0.59 MPMX20_03412 HTH-type transcriptional regulator IscR 0.56 MPMX20_01019 Protoheme IX farnesyltransferase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF2436 Iron-sulfur cluster regulator IscR 0.56 GFF4342 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB low > 78
Pseudomonas fluorescens FW300-N1B4 0.58 Pf1N1B4_866 Iron-sulfur cluster regulator IscR 0.56 Pf1N1B4_969 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB low > 87
Enterobacter asburiae PDN3 0.58 EX28DRAFT_0108 transcriptional regulator, BadM/Rrf2 family 0.56 EX28DRAFT_2543 protoheme IX farnesyltransferase low > 76
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_4874 Iron-sulfur cluster regulator IscR 0.55 PfGW456L13_4932 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB low > 87
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_3190 Iron-sulfur cluster regulator IscR 0.56 Pf6N2E2_5321 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB low > 103
Acinetobacter radioresistens SK82 0.55 MPMX26_01328 HTH-type transcriptional regulator IscR 0.40 MPMX26_01158 Protoheme IX farnesyltransferase low > 36

Not shown: 26 genomes with orthologs for Shewana3_2281 only; 0 genomes with orthologs for Shewana3_4035 only