Conservation of cofitness between Sama_2008 and Sama_2839 in Shewanella amazonensis SB2B

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_2008 cystathionine beta-lyase (RefSeq) 1.0 Sama_2839 sulfite reductase subunit alpha (RefSeq) 0.83 13
Shewanella oneidensis MR-1 0.83 SO2191 metC cystathionine beta-lyase (NCBI ptt file) 0.52 SO3738 cysJ sulfite reductase (NADPH) flavoprotein alpha-component (NCBI ptt file) 0.91 34
Shewanella sp. ANA-3 0.82 Shewana3_2414 cystathionine beta-lyase (RefSeq) 0.50 Shewana3_0855 sulfite reductase (NADPH) alpha subunit (RefSeq) 0.91 14
Shewanella loihica PV-4 0.82 Shew_1789 cystathionine beta-lyase (RefSeq) 0.52 Shew_0665 sulfite reductase (NADPH) flavoprotein, alpha chain (RefSeq) 0.89 48
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_08400 cystathionine beta-lyase 0.52 CSW01_02010 assimilatory sulfite reductase (NADPH) flavoprotein subunit low > 62
Dickeya dadantii 3937 0.55 DDA3937_RS01815 cystathionine beta-lyase 0.49 DDA3937_RS16945 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.90 17
Dickeya dianthicola 67-19 0.55 HGI48_RS01710 cystathionine beta-lyase 0.49 HGI48_RS17015 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.88 5
Dickeya dianthicola ME23 0.55 DZA65_RS01785 cystathionine beta-lyase 0.49 DZA65_RS18090 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.83 23
Pectobacterium carotovorum WPP14 0.54 HER17_RS19690 cystathionine beta-lyase 0.50 HER17_RS04235 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.96 19
Serratia liquefaciens MT49 0.53 IAI46_21725 cystathionine beta-lyase 0.49 IAI46_03685 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit low > 86
Rahnella sp. WP5 0.52 EX31_RS08025 cystathionine beta-lyase 0.51 EX31_RS07905 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit low > 89
Escherichia coli ECRC101 0.52 OKFHMN_18960 metC cystathionine beta-lyase 0.48 OKFHMN_20370 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF3120 Cystathionine beta-lyase (EC 4.4.1.8) 0.48 GFF4820 Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2) low > 78
Escherichia coli ECRC99 0.52 KEDOAH_09185 metC cystathionine beta-lyase 0.48 KEDOAH_07755 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit — —
Escherichia coli ECRC102 0.52 NIAGMN_16725 metC cystathionine beta-lyase 0.48 NIAGMN_18140 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit — —
Escherichia coli Nissle 1917 0.52 ECOLIN_RS17315 cystathionine beta-lyase 0.48 ECOLIN_RS15410 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit low > 52
Escherichia coli ECRC101 0.52 MCAODC_09475 metC cystathionine beta-lyase 0.48 MCAODC_10895 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit — —
Escherichia fergusonii Becca 0.52 EFB2_00802 Cystathionine beta-lyase MetC 0.48 EFB2_01153 Sulfite reductase [NADPH] flavoprotein alpha-component low > 86
Escherichia coli ECRC98 0.52 JDDGAC_22595 metC cystathionine beta-lyase 0.48 JDDGAC_24035 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_00693 Cystathionine beta-lyase MetC 0.49 OHPLBJKB_00969 Sulfite reductase [NADPH] flavoprotein alpha-component low > 73
Escherichia coli ECOR27 0.52 NOLOHH_10735 metC cystathionine beta-lyase 0.48 NOLOHH_12185 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit low > 57
Escherichia coli ECRC62 0.52 BNILDI_00780 metC cystathionine beta-lyase 0.49 BNILDI_10735 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit — —
Escherichia coli BL21 0.52 ECD_02881 cystathionine beta-lyase, PLP-dependent 0.49 ECD_02609 sulfite reductase, alpha subunit, flavoprotein low > 60
Escherichia coli ECOR38 0.52 HEPCGN_17825 metC cystathionine beta-lyase 0.48 HEPCGN_19095 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit low > 85
Escherichia coli BW25113 0.51 b3008 metC cystathionine beta-lyase (NCBI) 0.48 b2764 cysJ sulfite reductase, alpha subunit, flavoprotein (NCBI) 0.94 10
Klebsiella michiganensis M5al 0.51 BWI76_RS24285 cystathionine beta-lyase 0.50 BWI76_RS22765 sulfite reductase subunit alpha 0.83 40
Enterobacter asburiae PDN3 0.51 EX28DRAFT_3046 cystathionine beta-lyase, bacterial 0.49 EX28DRAFT_2853 sulfite reductase [NADPH] flavoprotein, alpha-component 0.77 24
Enterobacter sp. TBS_079 0.50 MPMX20_03852 Cystathionine beta-lyase MetC 0.48 MPMX20_03643 Sulfite reductase [NADPH] flavoprotein alpha-component 0.63 74
Erwinia tracheiphila SCR3 0.49 LU632_RS20545 metC cystathionine beta-lyase 0.49 LU632_RS06400 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.79 23
Pantoea sp. MT58 0.47 IAI47_03215 cystathionine beta-lyase 0.50 IAI47_04150 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit low > 76
Agrobacterium fabrum C58 0.43 Atu1575 cystathionine beta lyase 0.32 Atu0146 sulfite reductase (NADPH) flavoprotein alpha-component low > 89
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS30610 cystathionine beta-lyase 0.14 RR42_RS37040 sulfite reductase subunit alpha low > 128
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_01491 cystathionine beta-lyase 0.14 CCNA_03159 sulfite reductase (NADPH) flavoprotein alpha-component low > 67
Caulobacter crescentus NA1000 0.37 CCNA_01491 cystathionine beta-lyase 0.14 CCNA_03159 sulfite reductase (NADPH) flavoprotein alpha-component low > 66
Castellaniella sp019104865 MT123 0.36 ABCV34_RS12385 PLP-dependent aspartate aminotransferase family protein 0.38 ABCV34_RS00220 assimilatory sulfite reductase (NADPH) flavoprotein subunit low > 48

Not shown: 27 genomes with orthologs for Sama_2008 only; 9 genomes with orthologs for Sama_2839 only