Conservation of cofitness between Sama_2069 and Sama_2726 in Shewanella amazonensis SB2B

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_2069 MarR family transcriptional regulator (RefSeq) 1.0 Sama_2726 5-formyltetrahydrofolate cyclo-ligase family protein (RefSeq) 0.48 20
Shewanella sp. ANA-3 0.83 Shewana3_1739 MarR family transcriptional regulator (RefSeq) 0.46 Shewana3_3506 5-formyltetrahydrofolate cyclo-ligase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.82 SO2640 transcriptional regulator, MarR family (NCBI ptt file) 0.46 SO0774 5-formyltetrahydrofolate cyclo-ligase family protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.78 Shew_1552 MarR family transcriptional regulator (RefSeq) 0.39 Shew_3069 5-formyltetrahydrofolate cyclo-ligase (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.26 PGA1_c26010 transcriptional regulator, MarR family 0.12 PGA1_c21820 5-formyltetrahydrofolate cycloligase-like protein low > 62
Sinorhizobium meliloti 1021 0.25 SMc02851 transcriptional regulator 0.15 SMc03974 hypothetical protein low > 103
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_18435 MarR family transcriptional regulator 0.22 AO353_08780 5-formyltetrahydrofolate cyclo-ligase low > 101
Marinobacter adhaerens HP15 0.21 HP15_3821 transcriptional regulator, MarR family 0.31 HP15_3211 5-formyltetrahydrofolate cyclo-ligase low > 73
Pseudomonas simiae WCS417 0.21 PS417_19945 MarR family transcriptional regulator 0.23 PS417_27305 5-formyltetrahydrofolate cyclo-ligase low > 88
Azospirillum brasilense Sp245 0.21 AZOBR_RS02005 transcriptional regulator 0.13 AZOBR_RS09025 5-formyltetrahydrofolate cyclo-ligase — —
Desulfovibrio vulgaris Miyazaki F 0.21 DvMF_1558 transcriptional regulator, MarR family (RefSeq) 0.16 DvMF_2318 5-formyltetrahydrofolate cyclo-ligase (RefSeq) low > 51
Escherichia coli Nissle 1917 0.20 ECOLIN_RS09160 transcriptional regulator SlyA 0.39 ECOLIN_RS16205 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia fergusonii Becca 0.20 EFB2_02350 Transcriptional regulator SlyA 0.39 EFB2_00991 5-formyltetrahydrofolate cyclo-ligase low > 86
Escherichia coli ECOR38 0.20 HEPCGN_05860 slyA transcriptional regulator SlyA 0.39 HEPCGN_18775 ygfA 5-formyltetrahydrofolate cyclo-ligase low > 87
Dyella japonica UNC79MFTsu3.2 0.20 ABZR86_RS14780 MarR family transcriptional regulator 0.20 ABZR86_RS11995 5-formyltetrahydrofolate cyclo-ligase 0.53 28
Escherichia coli ECOR27 0.19 NOLOHH_17995 slyA transcriptional regulator SlyA 0.39 NOLOHH_11395 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECRC100 0.19 OKFHMN_27475 slyA transcriptional regulator SlyA 0.39 OKFHMN_19485 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECRC102 0.19 NIAGMN_00590 slyA transcriptional regulator SlyA 0.39 NIAGMN_17250 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECRC98 0.19 JDDGAC_02065 slyA transcriptional regulator SlyA 0.39 JDDGAC_23125 ygfA 5-formyltetrahydrofolate cyclo-ligase low > 86
Escherichia coli ECRC62 0.19 BNILDI_16785 slyA transcriptional regulator SlyA 0.39 BNILDI_09930 ygfA 5-formyltetrahydrofolate cyclo-ligase low > 75
Escherichia coli ECRC99 0.19 KEDOAH_00630 slyA transcriptional regulator SlyA 0.39 KEDOAH_08655 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECRC101 0.19 MCAODC_17935 slyA transcriptional regulator SlyA 0.39 MCAODC_10005 ygfA 5-formyltetrahydrofolate cyclo-ligase low > 87
Xanthomonas campestris pv. campestris strain 8004 0.18 Xcc-8004.3527.1 Transcriptional regulator, MarR family 0.21 Xcc-8004.1138.1 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.31 47
Echinicola vietnamensis KMM 6221, DSM 17526 0.18 Echvi_1068 Transcriptional regulators 0.13 Echvi_1511 5,10-methenyltetrahydrofolate synthetase 0.37 2
Pseudomonas sp. S08-1 0.18 OH686_20685 Transcriptional regulator SlyA 0.21 OH686_11225 5-formyltetrahydrofolate cyclo-ligase — —

Not shown: 20 genomes with orthologs for Sama_2069 only; 25 genomes with orthologs for Sama_2726 only