Conservation of cofitness between Sama_3385 and Sama_2439 in Shewanella amazonensis SB2B

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_3385 histidine ammonia-lyase (RefSeq) 1.0 Sama_2439 L-lactate permease, putative (RefSeq) 0.54 10
Shewanella loihica PV-4 0.82 Shew_3517 histidine ammonia-lyase (RefSeq) 0.84 Shew_3135 L-lactate permease (RefSeq) low > 60
Shewanella oneidensis MR-1 0.81 SO4374 histidine ammonia-lyase, putative (NCBI ptt file) 0.84 SO1522 D,L-lactate/pyruvate symporter LctP2 (from data) low > 76
Shewanella sp. ANA-3 0.81 Shewana3_0335 histidine ammonia-lyase (RefSeq) 0.83 Shewana3_2904 propionate/L-lactate/D-lactate transporter (from data) low > 73
Pseudomonas sp. S08-1 0.60 OH686_09920 Putative histidine ammonia-lyase protein 0.15 OH686_17015 L-lactate permease low > 80
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_12660 histidine ammonia-lyase 0.16 AO353_05700 L-lactate permease low > 101
Pseudomonas stutzeri RCH2 0.58 Psest_3695 Histidine ammonia-lyase 0.39 Psest_3836 L-lactate permease low > 67
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_09175 histidine ammonia-lyase 0.15 AO356_07550 L-lactate and D-lactate permease (lctP family) (from data) low > 104
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_3718 Putative histidine ammonia-lyase protein 0.15 Pf6N2E2_3380 L-lactate permease low > 103
Pseudomonas sp. RS175 0.58 PFR28_05031 Tyrosine 2,3-aminomutase 0.15 PFR28_00063 Glycolate permease GlcA low > 88
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_242 Putative histidine ammonia-lyase protein 0.15 PfGW456L13_5114 L-lactate permease low > 87
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS02125 aromatic amino acid lyase 0.16 PFLU_RS25945 L-lactate permease low > 109
Pseudomonas fluorescens SBW25 0.58 PFLU_RS02125 aromatic amino acid lyase 0.16 PFLU_RS25945 L-lactate permease low > 109
Pseudomonas simiae WCS417 0.57 PS417_02080 histidine ammonia-lyase 0.16 PS417_24105 D-lactate transporter (lctP family) (from data) low > 88
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_1509 Putative histidine ammonia-lyase protein 0.15 Pf1N1B4_1186 L-lactate permease low > 87
Ralstonia solanacearum GMI1000 0.55 RS_RS18910 histidine ammonia-lyase 0.11 RS_RS04855 L-lactate permease low > 80
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS03835 aromatic amino acid ammonia-lyase 0.14 QEN71_RS10155 lactate permease LctP family transporter low > 153
Burkholderia phytofirmans PsJN 0.54 BPHYT_RS15165 histidine ammonia-lyase 0.09 BPHYT_RS13235 lactate permease low > 109
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_03978 histidine ammonia-lyase 0.08 H281DRAFT_00392 lactate permease low > 103
Bacteroides ovatus ATCC 8483 0.23 BACOVA_01194 phenylalanine and histidine ammonia-lyase 0.06 BACOVA_04138 transporter, lactate permease (LctP) family low > 94

Not shown: 5 genomes with orthologs for Sama_3385 only; 41 genomes with orthologs for Sama_2439 only