Conservation of cofitness between Shew_2538 and Shew_1391 in Shewanella loihica PV-4

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_2538 AzlC family protein (RefSeq) 1.0 Shew_1391 CheW protein (RefSeq) 0.27 18
Shewanella sp. ANA-3 0.71 Shewana3_2694 AzlC family protein (RefSeq) 0.93 Shewana3_1367 CheW protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.67 SO1760 AzlC family protein (NCBI ptt file) 0.93 SO3202 cheW-3 purine-binding chemotaxis protein CheW (NCBI ptt file) low > 76
Pseudomonas aeruginosa PUPa3 0.50 DQ20_RS38700 AzlC family ABC transporter permease 0.76 DQ20_RS47200 chemotaxis protein CheW low > 101
Pseudomonas aeruginosa MRSN321 0.50 DY961_RS16375 AzlC family ABC transporter permease 0.76 DY961_RS05590 chemotaxis protein CheW 0.25 62
Pseudomonas aeruginosa PA14 0.50 IKLFDK_09975 branched-chain amino acid ABC transporter permease 0.76 IKLFDK_06965 purine-binding chemotaxis protein low > 98
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_19120 branched-chain amino acid ABC transporter permease 0.77 CSW01_10300 chemotaxis protein CheW low > 62
Pseudomonas simiae WCS417 0.48 PS417_14155 branched-chain amino acid ABC transporter permease 0.74 PS417_19650 chemotaxis protein CheW low > 88
Pseudomonas lactucae CFBP13502 0.48 GEMAOFIL_02908 Inner membrane protein YgaZ 0.73 GEMAOFIL_04129 Chemotaxis protein CheW low > 96
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS14445 AzlC family ABC transporter permease 0.74 PFLU_RS21615 chemotaxis protein CheW low > 109
Pseudomonas fluorescens SBW25 0.48 PFLU_RS14445 AzlC family ABC transporter permease 0.74 PFLU_RS21615 chemotaxis protein CheW low > 109
Pseudomonas sp. RS175 0.47 PFR28_02267 hypothetical protein 0.73 PFR28_00861 Chemotaxis protein CheW low > 88
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_28005 branched-chain amino acid ABC transporter permease 0.74 AO353_18830 chemotaxis protein CheW low > 101
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_5812 FIG00955248: hypothetical protein 0.74 Pf1N1B4_3635 Positive regulator of CheA protein activity (CheW) — —
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_3830 FIG00955248: hypothetical protein 0.74 PfGW456L13_4321 Positive regulator of CheA protein activity (CheW) low > 87
Pseudomonas sp. BP01 0.44 JOY50_RS10650 AzlC family ABC transporter permease 0.77 JOY50_RS00540 chemotaxis protein CheW low > 84
Pseudomonas putida KT2440 0.44 PP_2385 Branched-chain amino acid transport protein AzlC 0.77 PP_4332 Chemotaxis protein CheW low > 96
Pseudomonas sp. SVBP6 0.44 COO64_RS07880 AzlC family ABC transporter permease 0.78 COO64_RS25670 chemotaxis protein CheW low > 93
Acinetobacter baumannii LAC-4 0.36 RR41_RS05805 AzlC family ABC transporter permease 0.17 RR41_RS03415 chemotaxis protein CheW low > 55
Pseudomonas stutzeri RCH2 0.31 Psest_1529 Predicted branched-chain amino acid permease (azaleucine resistance) 0.77 Psest_1749 Chemotaxis signal transduction protein low > 67
Pseudomonas segetis P6 0.31 ACVTMO_RS08585 AzlC family ABC transporter permease 0.75 ACVTMO_RS15445 chemotaxis protein CheW low > 75
Pseudomonas sp. S08-1 0.29 OH686_19615 AzlC protein 0.73 OH686_02685 Positive regulator of CheA protein activity (CheW) low > 80
Sinorhizobium meliloti 1021 0.18 SMc00559 hypothetical protein 0.30 SMc03090 chemotaxis protein low > 103
Marinobacter adhaerens HP15 0.17 HP15_2622 AzlC family protein 0.75 HP15_2292 purine-binding chemotaxis protein CheW low > 73
Pseudomonas fluorescens FW300-N2E2 0.15 Pf6N2E2_97 putataive branched-chain amino acid transport protein AzlC 0.73 Pf6N2E2_2564 Positive regulator of CheA protein activity (CheW) low > 103
Pseudomonas sp. DMC3 0.15 GFF4148 Inner membrane protein YgaZ 0.74 GFF2481 Chemotaxis protein CheW low > 89
Alteromonas macleodii MIT1002 0.13 MIT1002_03073 Inner membrane protein YgaZ 0.78 MIT1002_01110 Chemotaxis protein CheW low > 70

Not shown: 37 genomes with orthologs for Shew_2538 only; 15 genomes with orthologs for Shew_1391 only