Conservation of cofitness between Shew_2934 and Shew_1387 in Shewanella loihica PV-4

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_2934 SPOUT methyltransferase superfamily protein (RefSeq) 1.0 Shew_1387 chemotaxis-specific methylesterase (RefSeq) 0.58 14
Shewanella amazonensis SB2B 0.94 Sama_2587 rRNA large subunit methyltransferase (RefSeq) 0.78 Sama_2276 chemotaxis-specific methylesterase (RefSeq) low > 62
Shewanella sp. ANA-3 0.93 Shewana3_0996 rRNA large subunit methyltransferase (RefSeq) 0.79 Shewana3_1363 chemotaxis-specific methylesterase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.93 SO1169 conserved hypothetical protein TIGR00246 (NCBI ptt file) 0.80 SO3206 cheB-3 protein-glutamate methylesterase CheB (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.81 CSW01_04865 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.65 CSW01_10315 chemotaxis response regulator protein-glutamate methylesterase low > 62
Alteromonas macleodii MIT1002 0.76 MIT1002_01852 Ribosomal RNA large subunit methyltransferase H 0.57 MIT1002_01107 Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon — —
Marinobacter adhaerens HP15 0.61 HP15_604 conserved hypothetical protein CHP00246 0.48 HP15_2297 response regulator receiver modulated CheB methylesterase low > 73
Pseudomonas putida KT2440 0.60 PP_4808 23S rRNA m3psi1915 methyltransferase 0.54 PP_4337 chemotaxis response regulator protein-glutamate methylesterase of group 1 operon low > 96
Pseudomonas simiae WCS417 0.60 PS417_24730 50S rRNA methyltransferase 0.55 PS417_19675 chemotaxis protein CheY — —
Pseudomonas fluorescens SBW25 0.60 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.53 PFLU_RS21640 chemotaxis response regulator protein-glutamate methylesterase low > 109
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.53 PFLU_RS21640 chemotaxis response regulator protein-glutamate methylesterase low > 109
Pseudomonas sp. RS175 0.60 PFR28_03869 Ribosomal RNA large subunit methyltransferase H 0.54 PFR28_00856 Protein-glutamate methylesterase/protein-glutamine glutaminase 1 low > 88
Pseudomonas sp. S08-1 0.59 OH686_09325 rRNA large subunit m3Psi methyltransferase RlmH 0.53 OH686_02710 Chemotaxis response regulator protein-glutamate methylesterase CheB low > 80
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_15305 50S rRNA methyltransferase 0.55 AO356_03710 chemotaxis protein CheY low > 104
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_06480 50S rRNA methyltransferase 0.55 AO353_18805 chemotaxis protein CheY low > 101
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_2691 LSU m3Psi1915 methyltransferase RlmH 0.54 Pf1N1B4_3630 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) — —
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_4996 LSU m3Psi1915 methyltransferase RlmH 0.55 Pf6N2E2_2569 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) low > 103
Pseudomonas fluorescens GW456-L13 0.59 PfGW456L13_1359 LSU m3Psi1915 methyltransferase RlmH 0.54 PfGW456L13_4327 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) low > 87
Pseudomonas stutzeri RCH2 0.57 Psest_0511 rRNA large subunit m3Psi methyltransferase RlmH 0.55 Psest_1744 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain low > 67
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU1254 conserved hypothetical protein (TIGR) 0.42 DVU2078 cheB-2 protein-glutamate methylesterase CheB (TIGR) low > 55

Not shown: 75 genomes with orthologs for Shew_2934 only; 1 genomes with orthologs for Shew_1387 only