Conservation of cofitness between Shew_2457 and Shew_0533 in Shewanella loihica PV-4

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_2457 nuclease SbcCD, D subunit (RefSeq) 1.0 Shew_0533 excinuclease ABC, A subunit (RefSeq) 0.47 3
Shewanella oneidensis MR-1 0.74 SO2844 exonuclease SbcD, putative (NCBI ptt file) 0.90 SO4030 uvrA excinuclease ABC, A subunit (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.74 Shewana3_2612 exodeoxyribonuclease I subunit D (RefSeq) 0.91 Shewana3_3592 excinuclease ABC subunit A (RefSeq) low > 73
Shewanella amazonensis SB2B 0.63 Sama_1267 exonuclease SbcD, putative (RefSeq) 0.88 Sama_0514 excinuclease ABC, A subunit (RefSeq) 0.38 13
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_16840 exonuclease sbcCD subunit D 0.81 CSW01_02080 UvrABC system protein A low > 62
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS35935 exonuclease SbcD 0.65 RR42_RS02145 excinuclease ABC subunit A low > 128
Klebsiella michiganensis M5al 0.20 BWI76_RS06225 exonuclease sbcCD subunit D 0.81 BWI76_RS01950 excinuclease ABC subunit A low > 92
Enterobacter sp. TBS_079 0.19 MPMX20_00985 Nuclease SbcCD subunit D 0.81 MPMX20_00276 UvrABC system protein A low > 85
Pectobacterium carotovorum WPP14 0.19 HER17_RS16045 exonuclease subunit SbcD 0.81 HER17_RS03550 excinuclease ABC subunit UvrA low > 75
Rahnella sp. WP5 0.18 EX31_RS22035 exonuclease subunit SbcD 0.81 EX31_RS11990 excinuclease ABC subunit UvrA low > 89
Pseudomonas sp. SVBP6 0.17 COO64_RS05450 exonuclease SbcCD subunit D C-terminal domain-containing protein 0.75 COO64_RS16075 uvrA excinuclease ABC subunit UvrA low > 93
Pseudomonas lactucae CFBP13502 0.16 GEMAOFIL_03324 Nuclease SbcCD subunit D 0.75 GEMAOFIL_05194 UvrABC system protein A low > 93
Pseudomonas fluorescens FW300-N1B4 0.16 Pf1N1B4_4633 Exonuclease SbcD 0.75 Pf1N1B4_2611 Excinuclease ABC subunit A — —
Pseudomonas fluorescens FW300-N2E2 0.15 Pf6N2E2_619 Exonuclease SbcD 0.75 Pf6N2E2_4888 Excinuclease ABC subunit A low > 103
Pseudomonas fluorescens FW300-N2C3 0.15 AO356_24630 exonuclease SbcD 0.75 AO356_14785 ABC-ATPase UvrA low > 104
Pseudomonas simiae WCS417 0.15 PS417_15115 exonuclease SbcD 0.75 PS417_25395 excinuclease ABC subunit A 0.50 3
Pseudomonas fluorescens SBW25-INTG 0.15 PFLU_RS17135 exonuclease subunit SbcD 0.75 PFLU_RS27025 excinuclease ABC subunit UvrA 0.16 19
Pseudomonas fluorescens SBW25 0.15 PFLU_RS17135 exonuclease subunit SbcD 0.75 PFLU_RS27025 excinuclease ABC subunit UvrA 0.59 63

Not shown: 0 genomes with orthologs for Shew_2457 only; 102 genomes with orthologs for Shew_0533 only