Conservation of cofitness between BT2741 and BT4043 in Bacteroides thetaiotaomicron VPI-5482

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT2741 sigma-54 modulation protein (NCBI ptt file) 1.0 BT4043 dimethyladenosine transferase (NCBI ptt file) 0.39 18
Bacteroides ovatus ATCC 8483 0.97 BACOVA_01049 hypothetical protein 0.95 BACOVA_04832 dimethyladenosine transferase 0.39 27
Bacteroides stercoris CC31F 0.89 HMPREF1181_RS00620 ribosome-associated translation inhibitor RaiA 0.90 HMPREF1181_RS09125 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 56
Phocaeicola vulgatus CL09T03C04 0.76 HMPREF1058_RS09440 ribosome-associated translation inhibitor RaiA 0.83 HMPREF1058_RS14130 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA 0.77 1
Phocaeicola dorei CL03T12C01 0.75 ABI39_RS03830 ribosome-associated translation inhibitor RaiA 0.83 ABI39_RS09780 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA 0.44 29
Parabacteroides merdae CL09T00C40 0.70 HMPREF1078_RS10880 ribosome-associated translation inhibitor RaiA 0.69 HMPREF1078_RS04880 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 61
Pedobacter sp. GW460-11-11-14-LB5 0.46 CA265_RS02840 30S ribosomal protein S30 0.49 CA265_RS18315 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.44 ABZR88_RS17795 ribosome-associated translation inhibitor RaiA 0.51 ABZR88_RS00050 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 71
Echinicola vietnamensis KMM 6221, DSM 17526 0.39 Echvi_0828 ribosomal subunit interface protein 0.49 Echvi_0183 dimethyladenosine transferase low > 79
Pontibacter actiniarum KMM 6156, DSM 19842 0.32 CA264_19030 ribosomal subunit interface protein 0.52 CA264_03850 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase low > 74
Shewanella oneidensis MR-1 0.29 SO3962 yfiA-3 ribosomal subunit interface protein (NCBI ptt file) 0.27 SO3639 ksgA dimethyladenosine transferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.29 Shewana3_0671 sigma 54 modulation protein / SSU ribosomal protein S30P (RefSeq) 0.27 Shewana3_3209 ksgA dimethyladenosine transferase (RefSeq) — —
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_2079 ribosomal subunit interface protein 0.30 B158DRAFT_0788 dimethyladenosine transferase low > 40
Dickeya dianthicola 67-19 0.28 HGI48_RS01440 ribosome hibernation promoting factor 0.25 HGI48_RS18200 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Dickeya dianthicola ME23 0.28 DZA65_RS01505 ribosome hibernation promoting factor 0.25 DZA65_RS19340 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Pectobacterium carotovorum WPP14 0.27 HER17_RS20065 ribosome hibernation promoting factor 0.25 HER17_RS02960 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 75
Shewanella amazonensis SB2B 0.27 Sama_3089 ribosomal subunit interface protein (RefSeq) 0.26 Sama_2819 ksgA dimethyladenosine transferase (RefSeq) — —
Dickeya dadantii 3937 0.27 DDA3937_RS01525 ribosome hibernation promoting factor 0.25 DDA3937_RS18265 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 74
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_07040 hypothetical protein 0.30 AO356_14335 rRNA methyltransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_3268 Ribosome hibernation protein YhbH 0.30 Pf6N2E2_4805 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) — —
Pseudomonas fluorescens FW300-N1B4 0.26 Pf1N1B4_1081 Ribosome hibernation protein YhbH 0.32 Pf1N1B4_2528 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) — —
Pseudomonas sp. S08-1 0.26 OH686_08550 Ribosome hibernation promoting factor Hpf 0.29 OH686_15040 ribosomal RNA small subunit methyltransferase A low > 80
Alteromonas macleodii MIT1002 0.26 MIT1002_00826 Ribosome hibernation promoting factor 0.24 MIT1002_00781 Ribosomal RNA small subunit methyltransferase A low > 70
Shewanella loihica PV-4 0.25 Shew_3312 sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) 0.27 Shew_0879 ksgA dimethyladenosine transferase (RefSeq) — —
Pseudomonas putida KT2440 0.25 PP_0951 Ribosome hibernation promoting factor 0.30 PP_0401 Ribosomal RNA small subunit methyltransferase A low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.25 Psyr_4148 sigma 54 modulation protein / SSU ribosomal protein S30P 0.31 Psyr_4627 dimethyladenosine transferase low > 86
Pseudomonas syringae pv. syringae B728a 0.25 Psyr_4148 sigma 54 modulation protein / SSU ribosomal protein S30P 0.31 Psyr_4627 dimethyladenosine transferase low > 86
Vibrio cholerae E7946 ATCC 55056 0.25 CSW01_12820 ribosome hibernation promoting factor 0.25 CSW01_02325 ribosomal RNA small subunit methyltransferase A — —
Pseudomonas simiae WCS417 0.25 PS417_04340 ribosome hibernation promoting factor HPF 0.31 PS417_25810 ribosomal RNA small subunit methyltransferase A — —

Not shown: 0 genomes with orthologs for BT2741 only; 73 genomes with orthologs for BT4043 only