Conservation of cofitness between BT4331 and BT3616 in Bacteroides thetaiotaomicron VPI-5482

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT4331 conserved hypothetical protein (NCBI ptt file) 1.0 BT3616 fucose permease (NCBI ptt file) 0.57 6
Bacteroides ovatus ATCC 8483 0.97 BACOVA_05134 hypothetical protein 0.74 BACOVA_03414 hypothetical protein low > 94
Phocaeicola dorei CL03T12C01 0.86 ABI39_RS18215 class I SAM-dependent rRNA methyltransferase 0.80 ABI39_RS01180 L-fucose:H+ symporter permease low > 72
Phocaeicola vulgatus CL09T03C04 0.84 HMPREF1058_RS05890 class I SAM-dependent rRNA methyltransferase 0.80 HMPREF1058_RS00305 L-fucose:H+ symporter permease low > 67
Pontibacter actiniarum KMM 6156, DSM 19842 0.57 CA264_05605 RlmI/RlmK family 23S rRNA methyltransferase 0.24 CA264_09125 glucose/galactose MFS transporter low > 74
Klebsiella michiganensis M5al 0.34 BWI76_RS10045 23S rRNA (cytosine(1962)-C(5))-methyltransferase 0.30 BWI76_RS22920 MFS transporter low > 92
Shewanella sp. ANA-3 0.33 Shewana3_0977 SAM-dependent methyltransferase (RefSeq) 0.26 Shewana3_2310 glucose/galactose transporter (RefSeq) low > 73
Pedobacter sp. GW460-11-11-14-LB5 0.32 CA265_RS19815 RlmI/RlmK family 23S rRNA methyltransferase 0.41 CA265_RS04675 L-fucose:H+ symporter permease low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF3258 LSU m5C1962 methyltransferase RlmI 0.32 GFF4858 Fucose permease low > 78
Rahnella sp. WP5 0.32 EX31_RS17990 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.31 EX31_RS02115 L-fucose:H+ symporter permease low > 89
Escherichia coli ECRC99 0.32 KEDOAH_22550 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.31 KEDOAH_07975 fucP L-fucose:H+ symporter permease — —
Escherichia coli ECRC101 0.32 MCAODC_24575 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.31 MCAODC_10680 fucP L-fucose:H+ symporter permease low > 87
Escherichia coli ECRC100 0.32 OKFHMN_05185 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.31 OKFHMN_20155 fucP L-fucose:H+ symporter permease low > 80
Escherichia coli ECRC62 0.32 BNILDI_19905 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.32 BNILDI_10540 fucP L-fucose:H+ symporter permease low > 75
Escherichia coli ECRC98 0.32 JDDGAC_08795 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.31 JDDGAC_23820 fucP L-fucose:H+ symporter permease low > 86
Escherichia coli ECRC102 0.32 NIAGMN_02905 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.31 NIAGMN_17925 fucP L-fucose:H+ symporter permease — —
Serratia liquefaciens MT49 0.32 IAI46_08925 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.31 IAI46_02820 L-fucose:H+ symporter permease low > 86
Escherichia coli BW25113 0.32 b0967 yccW predicted methyltransferase (RefSeq) 0.32 b2801 fucP L-fucose transporter (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_02699 Ribosomal RNA large subunit methyltransferase I 0.32 OHPLBJKB_00930 L-fucose-proton symporter low > 73
Escherichia coli ECOR27 0.32 NOLOHH_21740 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.32 NOLOHH_12035 fucP L-fucose:H+ symporter permease 0.58 6
Shewanella amazonensis SB2B 0.32 Sama_2965 putative SAM-dependent methyltransferase (RefSeq) 0.27 Sama_1663 glucose/galactose transporter (RefSeq) low > 62
Escherichia coli Nissle 1917 0.32 ECOLIN_RS05085 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.31 ECOLIN_RS15615 L-fucose:H+ symporter permease — —
Escherichia coli ECOR38 0.32 HEPCGN_23335 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.31 HEPCGN_19410 fucP L-fucose:H+ symporter permease low > 87
Escherichia fergusonii Becca 0.32 EFB2_03104 Ribosomal RNA large subunit methyltransferase I 0.31 EFB2_01116 L-fucose-proton symporter low > 86
Mucilaginibacter yixingensis YX-36 DSM 26809 0.31 ABZR88_RS22040 class I SAM-dependent rRNA methyltransferase 0.36 ABZR88_RS15275 L-fucose:H+ symporter permease low > 71
Lysobacter sp. OAE881 0.24 ABIE51_RS00980 class I SAM-dependent rRNA methyltransferase 0.29 ABIE51_RS10140 sugar MFS transporter low > 62
Rhodanobacter denitrificans FW104-10B01 0.22 LRK54_RS06920 class I SAM-dependent rRNA methyltransferase 0.26 LRK54_RS05055 L-fucose:H+ symporter permease low > 59
Rhodanobacter denitrificans MT42 0.21 LRK55_RS06665 class I SAM-dependent rRNA methyltransferase 0.26 LRK55_RS04835 L-fucose:H+ symporter permease low > 63
Pseudomonas fluorescens FW300-N2E2 0.20 Pf6N2E2_4566 LSU m5C1962 methyltransferase RlmI 0.26 Pf6N2E2_1003 Fucose permease low > 103
Pseudomonas fluorescens FW300-N2E3 0.20 AO353_08330 SAM-dependent methyltransferase 0.19 AO353_25100 glucose transporter low > 101
Rhodanobacter sp. FW510-T8 0.20 OKGIIK_16710 rlmK RlmI/RlmK family 23S rRNA methyltransferase 0.26 OKGIIK_01690 MFS transporter low > 52

Not shown: 50 genomes with orthologs for BT4331 only; 6 genomes with orthologs for BT3616 only