Conservation of cofitness between BT1438 and BT1236 in Bacteroides thetaiotaomicron VPI-5482

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT1438 putative membrane efflux protein (NCBI ptt file) 1.0 BT1236 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor (NCBI ptt file) 0.26 19
Bacteroides ovatus ATCC 8483 0.76 BACOVA_00864 transporter, major facilitator family protein 0.90 BACOVA_00529 5'-nucleotidase, C-terminal domain protein low > 94
Rahnella sp. WP5 0.49 EX31_RS22560 MFS transporter 0.15 EX31_RS08725 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase low > 89
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_09000 Fosmidomycin resistance protein 0.10 OKGIIK_13510 ushA bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase low > 52
Escherichia coli ECOR38 0.44 HEPCGN_06735 fsr fosmidomycin MFS transporter 0.14 HEPCGN_10240 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase 0.81 3
Klebsiella michiganensis M5al 0.44 BWI76_RS06860 MFS transporter 0.15 BWI76_RS02730 2',3'-cyclic-nucleotide 2'-phosphodiesterase low > 92
Escherichia coli ECRC101 0.44 MCAODC_27340 fsr fosmidomycin MFS transporter 0.14 MCAODC_02560 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase — —
Enterobacter sp. TBS_079 0.44 MPMX20_01080 Fosmidomycin resistance protein 0.14 MPMX20_00491 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase low > 85
Escherichia coli ECRC101 0.44 OKFHMN_08115 fsr fosmidomycin MFS transporter 0.14 OKFHMN_12045 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_03195 Fosmidomycin resistance protein 0.14 OHPLBJKB_03820 '2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase' transl_table=11 low > 73
Escherichia coli ECRC99 0.44 KEDOAH_19850 fsr fosmidomycin MFS transporter 0.14 KEDOAH_16110 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase — —
Escherichia coli Nissle 1917 0.44 ECOLIN_RS02840 fosmidomycin MFS transporter 0.14 ECOLIN_RS24475 2',3'-cyclic-nucleotide 2'-phosphodiesterase low > 52
Escherichia coli ECRC62 0.44 BNILDI_22465 fsr fosmidomycin MFS transporter 0.14 BNILDI_07215 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase — —
Escherichia coli ECRC98 0.44 JDDGAC_11765 fsr fosmidomycin MFS transporter 0.14 JDDGAC_15685 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase — —
Escherichia coli BW25113 0.44 b0479 fsr predicted fosmidomycin efflux system (NCBI) 0.14 b4213 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (NCBI) low > 76
Escherichia fergusonii Becca 0.44 EFB2_03579 Fosmidomycin resistance protein 0.14 EFB2_04315 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase low > 86
Escherichia coli ECRC102 0.44 NIAGMN_06170 fsr fosmidomycin MFS transporter 0.14 NIAGMN_09895 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase — —
Escherichia coli ECOR27 0.43 NOLOHH_01045 fsr fosmidomycin MFS transporter 0.14 NOLOHH_04305 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase low > 57
Escherichia coli BL21 0.43 ECD_00430 putative fosmidomycin efflux system protein 0.14 ECD_04085 2':3'-cyclic-nucleotide 2'-phosphodiesterase low > 60
Serratia liquefaciens MT49 0.43 IAI46_05285 MFS transporter 0.15 IAI46_01740 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase low > 86
Enterobacter asburiae PDN3 0.43 EX28DRAFT_2479 Nitrate/nitrite transporter 0.14 EX28DRAFT_3400 2',3'-cyclic-nucleotide 2'-phosphodiesterase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF4399 Fosmidomycin resistance protein 0.14 GFF866 '2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)' transl_table=11 low > 78
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS07470 MFS transporter 0.10 ABZR86_RS16000 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase low > 74
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS21910 MFS transporter 0.10 ABZR87_RS04330 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase low > 80
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS21480 MFS transporter 0.10 RALBFv3_RS09040 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase low > 76
Ralstonia solanacearum GMI1000 0.40 RS_RS19145 MFS transporter 0.10 RS_RS16850 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase low > 80
Ralstonia solanacearum UW163 0.40 UW163_RS17710 MFS transporter 0.10 UW163_RS04555 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase — —
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS00400 fosmidomycin resistance protein 0.11 RR42_RS03845 2', 3'-cyclic nucleotide 2'-phosphodiesterase low > 128
Ralstonia solanacearum PSI07 0.39 RPSI07_RS01655 MFS transporter 0.10 RPSI07_RS08230 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase low > 81
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_14690 Fosmidomycin resistance protein 0.08 AO353_04885 multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase low > 101
Pseudomonas putida KT2440 0.38 PP_0701 fosmidomycin efflux system 0.08 PP_1414 5'-nucleotidase - 2',3'-cyclic phosphodiesterase low > 96
Sinorhizobium meliloti 1021 0.37 SMc00990 fosmidomycin resistance antibiotic resistance transmembrane protein 0.13 SMc04449 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein low > 103
Rhizobium sp. OAE497 0.36 ABIE40_RS21720 MFS transporter 0.13 ABIE40_RS08240 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase low > 107
Rhodopseudomonas palustris CGA009 0.33 TX73_022370 MFS transporter 0.08 TX73_004920 bifunctional metallophosphatase/5'-nucleotidase low > 86
Variovorax sp. SCN45 0.13 GFF6472 membrane efflux protein 0.11 GFF5698 2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16) / 3'-nucleotidase (EC 3.1.3.6) low > 127

Not shown: 25 genomes with orthologs for BT1438 only; 17 genomes with orthologs for BT1236 only