Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Shewanella oneidensis MR-1 | 1.0 | SO4730 | hemN | oxygen-independent coproporphyrinogen III oxidase (NCBI ptt file) | 1.0 | SO2913 | pflA | pyruvate formate-lyase 1 activating enzyme (NCBI ptt file) | 0.47 | 5 |
Shewanella sp. ANA-3 | 0.96 | Shewana3_4116 | | coproporphyrinogen III oxidase (RefSeq) | 0.99 | Shewana3_1554 | pflA | pyruvate formate lyase-activating enzyme 1 (RefSeq) | low | > 73 |
Shewanella loihica PV-4 | 0.89 | Shew_3720 | | coproporphyrinogen III oxidase (RefSeq) | 0.83 | Shew_2391 | pflA | pyruvate formate lyase-activating enzyme 1 (RefSeq) | low | > 60 |
Shewanella amazonensis SB2B | 0.87 | Sama_0086 | | coproporphyrinogen III oxidase (RefSeq) | 0.84 | Sama_1497 | pflA | pyruvate formate lyase-activating enzyme 1 (RefSeq) | low | > 62 |
Enterobacter sp. TBS_079 | 0.67 | MPMX20_04598 | | Oxygen-independent coproporphyrinogen III oxidase | 0.72 | MPMX20_01561 | | Pyruvate formate-lyase 1-activating enzyme | low | > 85 |
Escherichia coli ECRC99 | 0.66 | KEDOAH_14030 | hemN | oxygen-independent coproporphyrinogen III oxidase | 0.72 | KEDOAH_22220 | pflA | pyruvate formate lyase 1-activating protein | — | — |
Escherichia coli BL21 | 0.66 | ECD_03752 | | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent | 0.72 | ECD_00906 | | pyruvate formate-lyase 1-activating enzyme; [formate-C-acetyltransferase 1]-activating enzyme; PFL activase | — | — |
Escherichia coli BW25113 | 0.66 | b3867 | hemN | O2-independent coproporphyrinogen III oxidase (VIMSS) | 0.72 | b0902 | pflA | pyruvate formate lyase activating enzyme 1 (NCBI) | 0.31 | 39 |
Escherichia coli ECOR27 | 0.66 | NOLOHH_06250 | hemN | oxygen-independent coproporphyrinogen III oxidase | 0.72 | NOLOHH_22075 | pflA | pyruvate formate lyase 1-activating protein | low | > 75 |
Escherichia coli ECRC102 | 0.66 | NIAGMN_11875 | hemN | oxygen-independent coproporphyrinogen III oxidase | 0.72 | NIAGMN_03235 | pflA | pyruvate formate lyase 1-activating protein | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.66 | OHPLBJKB_04186 | | Oxygen-independent coproporphyrinogen III oxidase | 0.72 | OHPLBJKB_02766 | | Pyruvate formate-lyase 1-activating enzyme | low | > 73 |
Escherichia coli ECRC98 | 0.66 | JDDGAC_17745 | hemN | oxygen-independent coproporphyrinogen III oxidase | 0.72 | JDDGAC_09325 | pflA | pyruvate formate lyase 1-activating protein | low | > 86 |
Escherichia coli ECRC101 | 0.66 | MCAODC_04620 | hemN | oxygen-independent coproporphyrinogen III oxidase | 0.72 | MCAODC_24905 | pflA | pyruvate formate lyase 1-activating protein | low | > 87 |
Escherichia coli ECRC100 | 0.66 | OKFHMN_14120 | hemN | oxygen-independent coproporphyrinogen III oxidase | 0.72 | OKFHMN_05515 | pflA | pyruvate formate lyase 1-activating protein | low | > 80 |
Escherichia coli ECRC62 | 0.66 | BNILDI_05280 | hemN | oxygen-independent coproporphyrinogen III oxidase | 0.72 | BNILDI_20330 | pflA | pyruvate formate lyase 1-activating protein | low | > 75 |
Escherichia coli Nissle 1917 | 0.66 | ECOLIN_RS22285 | | oxygen-independent coproporphyrinogen III oxidase | 0.72 | ECOLIN_RS04780 | | pyruvate formate lyase 1-activating protein | — | — |
Enterobacter asburiae PDN3 | 0.66 | EX28DRAFT_4348 | | oxygen-independent coproporphyrinogen III oxidase | 0.71 | EX28DRAFT_2033 | | pyruvate formate-lyase 1-activating enzyme | low | > 76 |
Escherichia fergusonii Becca | 0.66 | EFB2_04750 | | Oxygen-independent coproporphyrinogen III oxidase | 0.72 | EFB2_03162 | | Pyruvate formate-lyase 1-activating enzyme | low | > 86 |
Escherichia coli ECOR38 | 0.66 | HEPCGN_12755 | hemN | oxygen-independent coproporphyrinogen III oxidase | 0.72 | HEPCGN_23005 | pflA | pyruvate formate lyase 1-activating protein | low | > 87 |
Vibrio cholerae E7946 ATCC 55056 | 0.66 | CSW01_00590 | | oxygen-independent coproporphyrinogen III oxidase | 0.68 | CSW01_09365 | | pyruvate formate lyase 1-activating protein | low | > 62 |
Dickeya dadantii 3937 | 0.66 | DDA3937_RS00120 | | oxygen-independent coproporphyrinogen III oxidase | 0.74 | DDA3937_RS09650 | | pyruvate formate lyase 1-activating protein | 0.75 | 5 |
Dickeya dianthicola ME23 | 0.66 | DZA65_RS22220 | | oxygen-independent coproporphyrinogen III oxidase | 0.73 | DZA65_RS09970 | | pyruvate formate lyase 1-activating protein | low | > 75 |
Klebsiella michiganensis M5al | 0.66 | BWI76_RS00380 | | oxygen-independent coproporphyrinogen III oxidase | 0.71 | BWI76_RS09730 | | pyruvate formate lyase 1-activating protein | low | > 92 |
Serratia liquefaciens MT49 | 0.66 | IAI46_24970 | | oxygen-independent coproporphyrinogen III oxidase | 0.73 | IAI46_08605 | | pyruvate formate lyase 1-activating protein | 0.82 | 7 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.65 | GFF2219 | | Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) | 0.62 | GFF3656 | | Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) | low | > 78 |
Dickeya dianthicola 67-19 | 0.65 | HGI48_RS21245 | | oxygen-independent coproporphyrinogen III oxidase | 0.74 | HGI48_RS09660 | | pyruvate formate lyase 1-activating protein | 0.40 | 56 |
Pantoea sp. MT58 | 0.65 | IAI47_00445 | | oxygen-independent coproporphyrinogen III oxidase | 0.72 | IAI47_12885 | | pyruvate formate lyase 1-activating protein | 0.77 | 2 |
Rahnella sp. WP5 | 0.64 | EX31_RS15885 | | oxygen-independent coproporphyrinogen III oxidase | 0.74 | EX31_RS18470 | | pyruvate formate lyase 1-activating protein | low | > 89 |
Pectobacterium carotovorum WPP14 | 0.63 | HER17_RS21450 | | oxygen-independent coproporphyrinogen III oxidase | 0.74 | HER17_RS12310 | | pyruvate formate lyase 1-activating protein | 0.79 | 24 |
Erwinia tracheiphila SCR3 | 0.60 | LU632_RS22115 | hemN | oxygen-independent coproporphyrinogen III oxidase | 0.69 | LU632_RS09770 | pflA | pyruvate formate lyase 1-activating protein | low | > 74 |
Azospirillum sp. SherDot2 | 0.34 | MPMX19_02313 | | Oxygen-independent coproporphyrinogen III oxidase | 0.41 | MPMX19_04846 | | Pyruvate formate-lyase 1-activating enzyme | low | > 112 |
Parabacteroides merdae CL09T00C40 | 0.33 | HMPREF1078_RS13395 | | oxygen-independent coproporphyrinogen III oxidase | 0.46 | HMPREF1078_RS04215 | | pyruvate formate-lyase-activating protein | low | > 61 |
Azospirillum brasilense Sp245 | 0.33 | AZOBR_RS03710 | | coproporphyrinogen III oxidase | 0.39 | AZOBR_RS30150 | | pyruvate formate lyase-activating protein | 0.61 | 85 |
Rhodospirillum rubrum S1H | 0.31 | Rru_A2504 | | Oxygen-independent coproporphyrinogen III oxidase HemN (NCBI) | 0.38 | Rru_A2999 | | Radical SAM (NCBI) | — | — |
Bacteroides ovatus ATCC 8483 | 0.11 | BACOVA_00795 | | radical SAM domain protein | 0.37 | BACOVA_05596 | | pyruvate formate-lyase 1-activating enzyme | low | > 94 |