Conservation of cofitness between b0160 and b3497 in Escherichia coli BW25113

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0160 dgt deoxyguanosinetriphosphate triphosphohydrolase (NCBI) 1.0 b3497 yhiQ predicted SAM-dependent methyltransferase (NCBI) 0.29 9
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03502 Deoxyguanosinetriphosphate triphosphohydrolase 1.00 OHPLBJKB_00206 Ribosomal RNA small subunit methyltransferase J low > 73
Escherichia coli ECOR38 1.00 HEPCGN_08210 dgt dGTPase 1.00 HEPCGN_15330 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ low > 85
Escherichia coli BL21 1.00 ECD_00159 deoxyguanosine triphosphate triphosphohydrolase 1.00 ECD_03346 16S rRNA m(2)G1516 methyltransferase, SAM-dependent low > 60
Escherichia coli ECRC62 1.00 BNILDI_09065 dgt dGTPase 0.99 BNILDI_03205 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ — —
Escherichia coli ECOR27 0.99 NOLOHH_02605 dgt dGTPase 0.99 NOLOHH_08355 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ low > 57
Escherichia coli ECRC102 0.99 NIAGMN_08110 dgt dGTPase 1.00 NIAGMN_14185 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ — —
Escherichia coli ECRC99 0.99 KEDOAH_17895 dgt dGTPase 1.00 KEDOAH_11725 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ — —
Escherichia coli ECRC101 0.99 MCAODC_00775 dgt dGTPase 1.00 MCAODC_06935 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ — —
Escherichia coli ECRC98 0.99 JDDGAC_13855 dgt dGTPase 1.00 JDDGAC_20050 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ — —
Escherichia coli ECRC101 0.99 OKFHMN_10260 dgt dGTPase 1.00 OKFHMN_16420 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS00890 dGTPase 1.00 ECOLIN_RS19980 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ low > 52
Escherichia fergusonii Becca 0.99 EFB2_03884 Deoxyguanosinetriphosphate triphosphohydrolase 1.00 EFB2_00318 Ribosomal RNA small subunit methyltransferase J low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF61 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1), subgroup 1 0.95 GFF518 rRNA small subunit methyltransferase J low > 78
Klebsiella michiganensis M5al 0.87 BWI76_RS05175 dGTPase 0.93 BWI76_RS26605 16S rRNA (guanine(1516)-N(2))-methyltransferase low > 92
Enterobacter asburiae PDN3 0.85 EX28DRAFT_3749 deoxyguanosinetriphosphate triphosphohydrolase, putative 0.95 EX28DRAFT_4064 Putative SAM-dependent methyltransferase low > 76
Enterobacter sp. TBS_079 0.85 MPMX20_00846 Deoxyguanosinetriphosphate triphosphohydrolase 0.93 MPMX20_04396 Ribosomal RNA small subunit methyltransferase J low > 85
Serratia liquefaciens MT49 0.68 IAI46_03580 dGTPase 0.74 IAI46_24205 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ low > 86
Rahnella sp. WP5 0.61 EX31_RS03175 dGTPase 0.81 EX31_RS05160 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ low > 89
Pectobacterium carotovorum WPP14 0.60 HER17_RS05655 dGTPase 0.73 HER17_RS21305 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ low > 75
Dickeya dadantii 3937 0.59 DDA3937_RS15865 dGTPase 0.68 DDA3937_RS21270 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ low > 74
Dickeya dianthicola 67-19 0.59 HGI48_RS16005 dGTPase 0.66 HGI48_RS00040 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ low > 71
Dickeya dianthicola ME23 0.59 DZA65_RS17090 dGTPase 0.66 DZA65_RS00030 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ low > 75
Pantoea sp. MT58 0.58 IAI47_15565 dGTPase 0.77 IAI47_01350 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ low > 76
Erwinia tracheiphila SCR3 0.55 LU632_RS20005 dgt dGTPase 0.75 LU632_RS19465 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ low > 74
Pseudomonas stutzeri RCH2 0.41 Psest_2790 deoxyguanosinetriphosphate triphosphohydrolase, putative 0.38 Psest_1563 Protein of unknown function (DUF548). low > 67
Pseudomonas sp. S08-1 0.16 OH686_03080 dNTP triphosphohydrolase, broad substrate specificity, subgroup 3 0.38 OH686_06755 16S rRNA (guanine(1516)-N(2))-methyltransferase low > 80
Pseudomonas simiae WCS417 0.15 PS417_08610 deoxyguanosinetriphosphate triphosphohydrolase 0.35 PS417_06100 SAM-dependent methyltransferase low > 88
Pseudomonas putida KT2440 0.15 PP_2102 Deoxyguanosinetriphosphate triphosphohydrolase-like protein 0.37 PP_1513 Ribosomal RNA small subunit methyltransferase J low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.14 Psyr_2116 Deoxyguanosinetriphosphate triphosphohydrolase 0.40 Psyr_1325 Protein of unknown function DUF548 low > 86
Pseudomonas syringae pv. syringae B728a 0.14 Psyr_2116 Deoxyguanosinetriphosphate triphosphohydrolase 0.40 Psyr_1325 Protein of unknown function DUF548 — —
Pseudomonas fluorescens GW456-L13 0.14 PfGW456L13_2263 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) 0.35 PfGW456L13_4733 SAM-dependent methyltransferase (EC 2.1.1.-) low > 87
Pseudomonas fluorescens FW300-N1B4 0.14 Pf1N1B4_249 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) 0.36 Pf1N1B4_3060 SAM-dependent methyltransferase (EC 2.1.1.-) — —
Pseudomonas fluorescens FW300-N2C3 0.14 AO356_03040 deoxyguanosinetriphosphate triphosphohydrolase 0.35 AO356_06145 SAM-dependent methyltransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.14 Pf6N2E2_2435 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) 0.35 Pf6N2E2_3094 SAM-dependent methyltransferase (EC 2.1.1.-) low > 103
Pseudomonas sp. RS175 0.14 PFR28_00994 Deoxyguanosinetriphosphate triphosphohydrolase 0.35 PFR28_00376 Ribosomal RNA small subunit methyltransferase J low > 88
Pseudomonas fluorescens FW300-N2E3 0.14 AO353_19200 deoxyguanosinetriphosphate triphosphohydrolase 0.35 AO353_16350 SAM-dependent methyltransferase low > 101
Shewanella sp. ANA-3 0.12 Shewana3_2147 deoxyguanosinetriphosphate triphosphohydrolase-like protein (RefSeq) 0.58 Shewana3_4037 hypothetical protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.11 Sama_1695 deoxyguanosinetriphosphate triphosphohydrolase-like protein (RefSeq) 0.60 Sama_3564 hypothetical protein (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.09 MIT1002_02308 Deoxyguanosinetriphosphate triphosphohydrolase 0.39 MIT1002_00112 Ribosomal RNA small subunit methyltransferase J low > 70

Not shown: 31 genomes with orthologs for b0160 only; 2 genomes with orthologs for b3497 only