Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli BW25113 | 1.0 | b2029 | gnd | 6-phosphogluconate dehydrogenase (NCBI) | 1.0 | b3204 | ptsN | sugar-specific enzyme IIA component of PTS (NCBI) | 0.56 | 4 |
Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS11990 | | NADP-dependent phosphogluconate dehydrogenase | 0.99 | ECOLIN_RS18435 | | PTS IIA-like nitrogen regulatory protein PtsN | — | — |
Escherichia coli ECOR27 | 1.00 | NOLOHH_15785 | gndA | NADP-dependent phosphogluconate dehydrogenase | 1.00 | NOLOHH_09730 | ptsN | PTS IIA-like nitrogen regulatory protein PtsN | — | — |
Escherichia fergusonii Becca | 1.00 | EFB2_01826 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.99 | EFB2_00619 | | Nitrogen regulatory protein | low | > 86 |
Escherichia coli ECRC102 | 1.00 | NIAGMN_22415 | gndA | NADP-dependent phosphogluconate dehydrogenase | 1.00 | NIAGMN_15690 | ptsN | PTS IIA-like nitrogen regulatory protein PtsN | — | — |
Escherichia coli ECRC99 | 1.00 | KEDOAH_03680 | gndA | NADP-dependent phosphogluconate dehydrogenase | 1.00 | KEDOAH_10220 | ptsN | PTS IIA-like nitrogen regulatory protein PtsN | — | — |
Escherichia coli ECRC98 | 1.00 | JDDGAC_28580 | gndA | NADP-dependent phosphogluconate dehydrogenase | 1.00 | JDDGAC_21555 | ptsN | PTS IIA-like nitrogen regulatory protein PtsN | — | — |
Escherichia coli ECRC101 | 1.00 | MCAODC_20470 | gndA | NADP-dependent phosphogluconate dehydrogenase | 1.00 | MCAODC_08450 | ptsN | PTS IIA-like nitrogen regulatory protein PtsN | — | — |
Escherichia coli ECRC101 | 1.00 | OKFHMN_24470 | gndA | NADP-dependent phosphogluconate dehydrogenase | 1.00 | OKFHMN_17930 | ptsN | PTS IIA-like nitrogen regulatory protein PtsN | — | — |
Escherichia coli ECRC62 | 0.99 | BNILDI_14695 | gndA | NADP-dependent phosphogluconate dehydrogenase | 1.00 | BNILDI_01805 | ptsN | PTS IIA-like nitrogen regulatory protein PtsN | — | — |
Escherichia coli BL21 | 0.99 | ECD_01931 | | 6-phosphogluconate dehydrogenase, decarboxylating | 1.00 | ECD_03069 | | sugar-specific enzyme IIA component of PTS | — | — |
Escherichia coli ECOR38 | 0.99 | HEPCGN_03175 | gndA | NADP-dependent phosphogluconate dehydrogenase | 1.00 | HEPCGN_16805 | ptsN | PTS IIA-like nitrogen regulatory protein PtsN | low | > 85 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.97 | GFF3903 | | 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) | 0.95 | GFF2948 | | PTS system nitrogen-specific IIA component, PtsN | low | > 78 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.97 | OHPLBJKB_01659 | | 6-phosphogluconate dehydrogenase, decarboxylating | 1.00 | OHPLBJKB_00496 | | Nitrogen regulatory protein | low | > 73 |
Enterobacter asburiae PDN3 | 0.96 | EX28DRAFT_0529 | | 6-phosphogluconate dehydrogenase (decarboxylating) | 0.93 | EX28DRAFT_3258 | | PTS IIA-like nitrogen-regulatory protein PtsN | — | — |
Enterobacter sp. TBS_079 | 0.96 | MPMX20_03014 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.93 | MPMX20_04110 | | Nitrogen regulatory protein | low | > 85 |
Klebsiella michiganensis M5al | 0.95 | BWI76_RS19025 | | phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) | 0.90 | BWI76_RS25275 | | PTS IIA-like nitrogen regulatory protein PtsN | — | — |
Serratia liquefaciens MT49 | 0.89 | IAI46_08160 | | NADP-dependent phosphogluconate dehydrogenase | 0.85 | IAI46_22480 | | PTS IIA-like nitrogen regulatory protein PtsN | — | — |
Dickeya dadantii 3937 | 0.89 | DDA3937_RS06805 | | NADP-dependent phosphogluconate dehydrogenase | 0.81 | DDA3937_RS01520 | | PTS IIA-like nitrogen regulatory protein PtsN | low | > 74 |
Pantoea sp. MT58 | 0.89 | IAI47_07035 | | NADP-dependent phosphogluconate dehydrogenase | 0.83 | IAI47_17195 | | PTS IIA-like nitrogen regulatory protein PtsN | — | — |
Rahnella sp. WP5 | 0.88 | EX31_RS11475 | | NADP-dependent phosphogluconate dehydrogenase | 0.83 | EX31_RS12390 | | PTS IIA-like nitrogen regulatory protein PtsN | — | — |
Pectobacterium carotovorum WPP14 | 0.88 | HER17_RS14505 | | NADP-dependent phosphogluconate dehydrogenase | 0.78 | HER17_RS20070 | | PTS IIA-like nitrogen regulatory protein PtsN | low | > 75 |
Dickeya dianthicola ME23 | 0.88 | DZA65_RS07180 | | NADP-dependent phosphogluconate dehydrogenase | 0.81 | DZA65_RS01500 | | PTS IIA-like nitrogen regulatory protein PtsN | low | > 75 |
Dickeya dianthicola 67-19 | 0.87 | HGI48_RS06840 | | NADP-dependent phosphogluconate dehydrogenase | 0.82 | HGI48_RS01435 | | PTS IIA-like nitrogen regulatory protein PtsN | low | > 71 |
Erwinia tracheiphila SCR3 | 0.87 | LU632_RS08890 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.77 | LU632_RS21290 | ptsN | PTS IIA-like nitrogen regulatory protein PtsN | — | — |
Burkholderia phytofirmans PsJN | 0.73 | BPHYT_RS29625 | | 6-phosphogluconate dehydrogenase | 0.28 | BPHYT_RS02895 | | PTS sugar transporter subunit IIA | — | — |
Variovorax sp. SCN45 | 0.55 | GFF2954 | | 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) | 0.28 | GFF7294 | | PTS IIA-like nitrogen-regulatory protein PtsN | low | > 127 |
Variovorax sp. OAS795 | 0.55 | ABID97_RS10190 | | decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase | 0.29 | ABID97_RS04495 | | PTS sugar transporter subunit IIA | — | — |
Vibrio cholerae E7946 ATCC 55056 | 0.54 | CSW01_18635 | | phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) | 0.54 | CSW01_12825 | | PTS IIA-like nitrogen-regulatory protein PtsN | — | — |
Sinorhizobium meliloti 1021 | 0.47 | SMc04262 | | 6-phosphogluconate dehydrogenase | 0.37 | SMc01141 | | nitrogen regulatory IIA protein | — | — |
Rhizobium sp. OAE497 | 0.46 | ABIE40_RS11035 | | NADP-dependent phosphogluconate dehydrogenase | 0.36 | ABIE40_RS01870 | | PTS IIA-like nitrogen regulatory protein PtsN | — | — |
Alteromonas macleodii MIT1002 | 0.46 | MIT1002_02397 | | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating | 0.37 | MIT1002_00825 | | Nitrogen regulatory protein | low | > 70 |
Agrobacterium fabrum C58 | 0.46 | Atu1526 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.36 | Atu0330 | | nitrogen regulatory IIA protein | — | — |
Azospirillum brasilense Sp245 | 0.43 | AZOBR_RS15725 | | 6-phosphogluconate dehydrogenase | 0.35 | AZOBR_RS18880 | | nitrogen regulatory protein | — | — |
Shewanella amazonensis SB2B | 0.43 | Sama_1365 | | 6-phosphogluconate dehydrogenase (RefSeq) | 0.45 | Sama_3090 | | nitrogen regulatory IIA protein (RefSeq) | low | > 62 |
Shewanella oneidensis MR-1 | 0.43 | SO1902 | gnd | 6-phosphogluconate dehydrogenase, decarboxylating (NCBI ptt file) | 0.47 | SO3963 | ptsN | nitrogen regulatory IIA protein (NCBI ptt file) | low | > 76 |
Shewanella sp. ANA-3 | 0.43 | Shewana3_1677 | | 6-phosphogluconate dehydrogenase (RefSeq) | 0.48 | Shewana3_0670 | | PTS IIA-like nitrogen-regulatory protein PtsN (RefSeq) | low | > 73 |
Shewanella loihica PV-4 | 0.43 | Shew_2561 | | 6-phosphogluconate dehydrogenase (RefSeq) | 0.48 | Shew_3313 | | PTS IIA-like nitrogen-regulatory protein PtsN (RefSeq) | low | > 60 |
Not shown: 16 genomes with orthologs for b2029 only; 35 genomes with orthologs for b3204 only