Conservation of cofitness between b0307 and b2254 in Escherichia coli BW25113

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0307 ykgF predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain (NCBI) 1.0 b2254 yfbF undecaprenyl phosphate-L-Ara4FN transferase (NCBI) 0.17 9
Escherichia coli BL21 1.00 ECD_00263 ferridoxin-like LutB family protein; putative electron transport chain YkgEFG component 1.00 ECD_02180 undecaprenyl phosphate-L-Ara4FN transferase low > 60
Escherichia coli Nissle 1917 1.00 ECOLIN_RS02005 LutB/LldF family L-lactate oxidation iron-sulfur protein 0.99 ECOLIN_RS13130 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase — —
Escherichia coli ECRC101 1.00 MCAODC_28325 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 1.00 MCAODC_14030 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase — —
Escherichia coli ECRC98 1.00 JDDGAC_12750 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 1.00 JDDGAC_26955 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase — —
Escherichia coli ECRC101 1.00 OKFHMN_09100 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 1.00 OKFHMN_22990 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase — —
Escherichia coli ECRC99 1.00 KEDOAH_18865 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 1.00 KEDOAH_05205 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase — —
Escherichia coli ECRC102 1.00 NIAGMN_07165 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 1.00 NIAGMN_20760 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase — —
Escherichia fergusonii Becca 0.99 EFB2_03733 Lactate utilization protein B 0.99 EFB2_01602 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 86
Escherichia coli ECOR38 0.99 HEPCGN_07625 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.99 HEPCGN_22205 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 85
Escherichia coli ECRC62 0.99 BNILDI_00040 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 1.00 BNILDI_13530 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03375 Lactate utilization protein B 1.00 OHPLBJKB_01457 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 73
Escherichia coli ECOR27 0.99 NOLOHH_01915 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 1.00 NOLOHH_14615 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 57
Dickeya dadantii 3937 0.86 DDA3937_RS12260 iron-sulfur cluster-binding protein 0.80 DDA3937_RS21385 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 74
Dickeya dianthicola 67-19 0.85 HGI48_RS12350 iron-sulfur cluster-binding protein 0.79 HGI48_RS21630 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 71
Dickeya dianthicola ME23 0.85 DZA65_RS12790 iron-sulfur cluster-binding protein 0.78 DZA65_RS22615 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 75
Ralstonia solanacearum PSI07 0.39 RPSI07_RS15880 iron-sulfur cluster-binding protein 0.49 RPSI07_RS17520 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase — —
Ralstonia solanacearum GMI1000 0.39 RS_RS08115 iron-sulfur cluster-binding protein 0.49 RS_RS06625 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase — —
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS07435 (Fe-S)-binding protein 0.45 RR42_RS30910 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase — —
Ralstonia solanacearum UW163 0.39 UW163_RS14915 iron-sulfur cluster-binding protein 0.49 UW163_RS13290 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase — —
Ralstonia solanacearum IBSBF1503 0.39 RALBFv3_RS01605 iron-sulfur cluster-binding protein 0.49 RALBFv3_RS15845 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase — —
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS13405 LutB/LldF family L-lactate oxidation iron-sulfur protein 0.48 ABZR87_RS11415 glycosyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_05710 (Fe-S)-binding protein 0.68 AO353_25535 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase — —
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_00473 iron-sulfur cluster-binding protein 0.47 H281DRAFT_00804 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase — —
Paraburkholderia graminis OAS925 0.36 ABIE53_002786 L-lactate dehydrogenase complex protein LldF 0.47 ABIE53_002020 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase — —
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS05760 lactate utilization protein B 0.47 QEN71_RS22435 glycosyltransferase — —
Rhodospirillum rubrum S1H 0.35 Rru_A3605 Iron-sulfur cluster binding protein (NCBI) 0.27 Rru_A1005 Glycosyl transferase, family 2 (NCBI) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.35 ABZR88_RS22260 LutB/LldF family L-lactate oxidation iron-sulfur protein 0.24 ABZR88_RS10610 glycosyltransferase family 2 protein — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.35 CA264_18295 iron-sulfur cluster-binding protein 0.24 CA264_01495 glycosyltransferase — —
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS12805 hypothetical protein 0.48 BPHYT_RS08925 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase — —
Pedobacter sp. GW460-11-11-14-LB5 0.34 CA265_RS18400 iron-sulfur cluster-binding protein 0.22 CA265_RS03725 glycosyltransferase — —
Azospirillum sp. SherDot2 0.34 MPMX19_06094 Lactate utilization protein B 0.27 MPMX19_06656 Dodecaprenyl-phosphate galacturonate synthase low > 112
Echinicola vietnamensis KMM 6221, DSM 17526 0.33 Echvi_1568 Uncharacterized conserved protein containing a ferredoxin-like domain 0.27 Echvi_0903 Glycosyltransferases involved in cell wall biogenesis low > 79
Bacteroides ovatus ATCC 8483 0.31 BACOVA_05263 putative iron-sulfur cluster-binding protein 0.25 BACOVA_05364 glycosyltransferase, group 2 family protein — —
Parabacteroides merdae CL09T00C40 0.30 HMPREF1078_RS01310 lactate utilization protein B 0.24 HMPREF1078_RS10445 glycosyltransferase — —
Phocaeicola vulgatus CL09T03C04 0.30 HMPREF1058_RS18105 lactate utilization protein 0.25 HMPREF1058_RS17200 glycosyltransferase family 2 protein — —
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS14430 lactate utilization protein 0.25 ABI39_RS13200 glycosyltransferase family 2 protein — —

Not shown: 16 genomes with orthologs for b0307 only; 17 genomes with orthologs for b2254 only