Conservation of cofitness between b0219 and b1622 in Escherichia coli BW25113

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0219 yafV predicted C-N hydrolase family amidase, NAD(P)-binding (NCBI) 1.0 b1622 malY bifunctional beta-cystathionase, PLP-dependent/ regulator of maltose regulon (NCBI) 0.19 5
Escherichia coli BL21 1.00 ECD_00214 putative NAD(P)-binding C-N hydrolase family amidase 0.99 ECD_01591 PLP-dependent beta-cystathionase and maltose regulon regulator low > 60
Escherichia coli ECOR27 0.99 NOLOHH_02165 yafV 2-oxoglutaramate amidase 0.99 NOLOHH_18100 malY bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY — —
Escherichia fergusonii Becca 0.98 EFB2_03798 Omega-amidase YafV 0.99 EFB2_02370 Protein MalY low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_03420 Omega-amidase YafV 1.00 OHPLBJKB_02104 Protein MalY low > 73
Escherichia coli ECRC98 0.98 JDDGAC_13415 yafV 2-oxoglutaramate amidase 1.00 JDDGAC_02175 malY bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY — —
Escherichia coli ECRC101 0.98 OKFHMN_09790 yafV 2-oxoglutaramate amidase 1.00 OKFHMN_27585 malY bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY — —
Escherichia coli ECRC99 0.98 KEDOAH_18365 yafV 2-oxoglutaramate amidase 1.00 KEDOAH_00520 malY bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY — —
Escherichia coli ECRC62 0.98 BNILDI_00360 yafV 2-oxoglutaramate amidase 0.99 BNILDI_16890 malY bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY — —
Escherichia coli ECRC101 0.98 MCAODC_00310 yafV 2-oxoglutaramate amidase 1.00 MCAODC_17825 malY bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY — —
Escherichia coli Nissle 1917 0.98 ECOLIN_RS01735 2-oxoglutaramate amidase 0.99 ECOLIN_RS09050 bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY low > 52
Escherichia coli ECOR38 0.98 HEPCGN_07895 yafV 2-oxoglutaramate amidase 0.99 HEPCGN_05965 malY bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY low > 85
Enterobacter sp. TBS_079 0.87 MPMX20_00909 Omega-amidase YafV 0.76 MPMX20_02016 Protein MalY low > 85
Klebsiella michiganensis M5al 0.86 BWI76_RS05465 amidohydrolase 0.75 BWI76_RS16300 bifunctional beta-cystathionase/maltose regulon regulatory protein low > 92
Enterobacter asburiae PDN3 0.86 EX28DRAFT_2669 Predicted amidohydrolase 0.78 EX28DRAFT_1617 putative C-S lyase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF4099 Aliphatic amidase AmiE (EC 3.5.1.4) 0.26 GFF2547 Aspartate aminotransferase (EC 2.6.1.1) low > 78
Pantoea sp. MT58 0.74 IAI47_15230 amidohydrolase 0.65 IAI47_10360 pyridoxal phosphate-dependent aminotransferase low > 76
Rahnella sp. WP5 0.69 EX31_RS21070 amidohydrolase 0.72 EX31_RS06865 pyridoxal phosphate-dependent aminotransferase low > 89
Serratia liquefaciens MT49 0.68 IAI46_04295 amidohydrolase 0.74 IAI46_11595 pyridoxal phosphate-dependent aminotransferase low > 86
Pseudomonas simiae WCS417 0.47 PS417_23115 carbon-nitrogen hydrolase 0.24 PS417_12965 aminotransferase low > 88
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_3172 Aliphatic amidase AmiE (EC 3.5.1.4) 0.26 Pf6N2E2_1210 putative aminotransferase low > 103
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_4855 Aliphatic amidase AmiE (EC 3.5.1.4) 0.26 PfGW456L13_3090 putative aminotransferase low > 87
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS24770 amidohydrolase 0.24 PFLU_RS13630 putative C-S lyase low > 109
Pseudomonas fluorescens SBW25 0.46 PFLU_RS24770 amidohydrolase 0.24 PFLU_RS13630 putative C-S lyase low > 109
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_06560 carbon-nitrogen hydrolase 0.25 AO356_26930 aminotransferase low > 104
Pseudomonas sp. RS175 0.46 PFR28_00303 Omega-amidase YafV 0.26 PFR28_02099 Cystathionine beta-lyase PatB low > 88
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_848 Aliphatic amidase AmiE (EC 3.5.1.4) 0.26 Pf1N1B4_4946 putative aminotransferase low > 87
Phocaeicola vulgatus CL09T03C04 0.45 HMPREF1058_RS15460 amidohydrolase 0.29 HMPREF1058_RS07560 pyridoxal phosphate-dependent aminotransferase low > 67
Phocaeicola dorei CL03T12C01 0.45 ABI39_RS11430 amidohydrolase 0.30 ABI39_RS19290 pyridoxal phosphate-dependent aminotransferase low > 72
Bacteroides thetaiotaomicron VPI-5482 0.42 BT0259 putative amidohydrolase (NCBI ptt file) 0.30 BT4138 putative aminotransferase (NCBI ptt file) low > 81
Parabacteroides merdae CL09T00C40 0.42 HMPREF1078_RS14090 amidohydrolase 0.29 HMPREF1078_RS16700 PatB family C-S lyase low > 61
Bacteroides ovatus ATCC 8483 0.42 BACOVA_00412 hydrolase, carbon-nitrogen family 0.32 BACOVA_04944 aminotransferase, class I/II low > 94
Bacteroides stercoris CC31F 0.42 HMPREF1181_RS04595 amidohydrolase 0.27 HMPREF1181_RS06410 pyridoxal phosphate-dependent aminotransferase low > 56
Marinobacter adhaerens HP15 0.12 HP15_2449 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.30 HP15_3572 aminotransferase, classes I and II low > 73

Not shown: 39 genomes with orthologs for b0219 only; 11 genomes with orthologs for b1622 only