Conservation of cofitness between b1800 and b1185 in Escherichia coli BW25113

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1800 yeaU predicted dehydrogenase (NCBI) 1.0 b1185 dsbB reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) 0.23 19
Escherichia coli ECRC62 1.00 BNILDI_15930 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 BNILDI_18910 dsbB disulfide bond formation protein DsbB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01933 D-malate dehydrogenase [decarboxylating] 1.00 OHPLBJKB_02504 Disulfide bond formation protein B low > 73
Escherichia coli ECRC98 1.00 JDDGAC_01200 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 JDDGAC_06240 dsbB disulfide bond formation protein DsbB — —
Escherichia coli ECRC101 1.00 OKFHMN_26625 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 OKFHMN_28270 dsbB disulfide bond formation protein DsbB — —
Escherichia coli ECOR27 1.00 NOLOHH_17145 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 NOLOHH_20745 dsbB disulfide bond formation protein DsbB — —
Escherichia coli BL21 1.00 ECD_01770 D-malate oxidase, NAD-dependent; putative tartrate dehydrogenase 1.00 ECD_01160 oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I 0.74 14
Escherichia coli ECRC102 1.00 NIAGMN_01440 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 NIAGMN_27950 dsbB disulfide bond formation protein DsbB — —
Escherichia coli ECRC101 1.00 MCAODC_18785 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 MCAODC_21900 dsbB disulfide bond formation protein DsbB — —
Escherichia coli ECRC99 1.00 KEDOAH_01485 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 KEDOAH_25285 dsbB disulfide bond formation protein DsbB — —
Escherichia coli ECOR38 1.00 HEPCGN_05015 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 HEPCGN_24730 dsbB disulfide bond formation protein DsbB low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS10680 tartrate dehydrogenase 0.85 BWI76_RS17755 disulfide bond formation protein B — —
Serratia liquefaciens MT49 0.84 IAI46_21025 tartrate dehydrogenase 0.69 IAI46_14485 disulfide bond formation protein DsbB — —
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_28225 tartrate dehydrogenase 0.15 AO353_15445 disulfide bond formation protein B low > 101
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_4932 Tartrate dehydrogenase (EC 1.1.1.93) / Tartrate decarboxylase (EC 4.1.1.73) / D-malic enzyme (EC 1.1.1.83) 0.15 Pf1N1B4_2189 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation low > 87
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_369 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) 0.14 Pf6N2E2_5316 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation low > 103
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS19735 tartrate dehydrogenase 0.15 PFLU_RS25225 disulfide bond formation protein B low > 109
Pseudomonas fluorescens SBW25 0.78 PFLU_RS19735 tartrate dehydrogenase 0.15 PFLU_RS25225 disulfide bond formation protein B low > 109
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_2396 Tartrate dehydrogenase 0.16 Psyr_1140 Disulfide bond formation protein DsbB low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_2396 Tartrate dehydrogenase 0.16 Psyr_1140 Disulfide bond formation protein DsbB low > 86
Ralstonia solanacearum PSI07 0.74 RPSI07_RS04610 tartrate dehydrogenase 0.17 RPSI07_RS17265 disulfide bond formation protein B — —
Ralstonia sp. UNC404CL21Col 0.74 ABZR87_RS21505 tartrate dehydrogenase 0.19 ABZR87_RS11675 disulfide bond formation protein B low > 80
Ralstonia solanacearum IBSBF1503 0.74 RALBFv3_RS18940 tartrate dehydrogenase 0.17 RALBFv3_RS00215 disulfide bond formation protein B — —
Ralstonia solanacearum UW163 0.74 UW163_RS20190 tartrate dehydrogenase 0.17 UW163_RS13545 disulfide bond formation protein B — —
Acidovorax sp. GW101-3H11 0.73 Ac3H11_3259 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) 0.19 Ac3H11_908 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation — —
Variovorax sp. OAS795 0.73 ABID97_RS25885 tartrate dehydrogenase 0.16 ABID97_RS15590 disulfide bond formation protein B low > 91
Ralstonia solanacearum GMI1000 0.72 RS_RS24845 tartrate dehydrogenase 0.17 RS_RS06885 disulfide bond formation protein B — —
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS30235 tartrate dehydrogenase 0.15 BPHYT_RS15075 dihydrokaempferol 4-reductase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_06345 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase 0.14 H281DRAFT_03960 disulfide bond formation protein DsbB — —
Pantoea sp. MT58 0.67 IAI47_17525 tartrate dehydrogenase 0.68 IAI47_08875 disulfide bond formation protein DsbB — —
Dickeya dadantii 3937 0.66 DDA3937_RS04645 tartrate dehydrogenase 0.74 DDA3937_RS11185 disulfide bond formation protein DsbB low > 74
Variovorax sp. SCN45 0.66 GFF2854 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) 0.19 GFF1291 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation — —
Dickeya dianthicola ME23 0.66 DZA65_RS04525 tartrate dehydrogenase 0.74 DZA65_RS11565 disulfide bond formation protein DsbB low > 75
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF3852 Tartrate dehydrogenase (EC 1.1.1.93) / Tartrate decarboxylase (EC 4.1.1.73) / D-malic enzyme (EC 1.1.1.83) 0.18 GFF4299 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation low > 90
Dickeya dianthicola 67-19 0.65 HGI48_RS04605 tartrate dehydrogenase 0.74 HGI48_RS11220 disulfide bond formation protein DsbB low > 71

Not shown: 25 genomes with orthologs for b1800 only; 21 genomes with orthologs for b1185 only