Conservation of cofitness between b1802 and b1086 in Escherichia coli BW25113

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1802 yeaW predicted 2Fe-2S cluster-containing protein (NCBI) 1.0 b1086 rluC 23S rRNA pseudouridylate synthase (NCBI) 0.17 9
Escherichia coli BL21 1.00 ECD_01772 putative YeaWX dioxygenase alpha subunit; 2Fe-2S cluster 1.00 ECD_01082 23S rRNA pseudouridine(955,2504,2580) synthase low > 60
Escherichia coli ECRC102 1.00 NIAGMN_01450 yeaW carnitine monooxygenase subunit YeaW 1.00 NIAGMN_24215 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECRC101 1.00 MCAODC_18795 yeaW carnitine monooxygenase subunit YeaW 1.00 MCAODC_22975 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECRC98 1.00 JDDGAC_01190 yeaW carnitine monooxygenase subunit YeaW 1.00 JDDGAC_07275 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECRC62 1.00 BNILDI_15920 yeaW carnitine monooxygenase subunit YeaW 1.00 BNILDI_19305 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECOR27 1.00 NOLOHH_17135 yeaW carnitine monooxygenase subunit YeaW 1.00 NOLOHH_21145 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01931 Carnitine monooxygenase oxygenase subunit 1.00 OHPLBJKB_02580 Ribosomal large subunit pseudouridine synthase C low > 73
Escherichia coli ECRC101 1.00 OKFHMN_26615 yeaW carnitine monooxygenase subunit YeaW 1.00 OKFHMN_03615 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECRC99 1.00 KEDOAH_01495 yeaW carnitine monooxygenase subunit YeaW 1.00 KEDOAH_24140 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECOR38 1.00 HEPCGN_05005 yeaW carnitine monooxygenase subunit YeaW 1.00 HEPCGN_23865 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.66 79
Rhodanobacter sp. FW510-T8 0.23 OKGIIK_11350 (2Fe-2S)-binding protein 0.45 OKGIIK_07405 rluA 23S rRNA pseudouridine(955/2504/2580) synthase low > 52
Rhodanobacter denitrificans MT42 0.22 LRK55_RS04295 SRPBCC family protein 0.45 LRK55_RS17750 RluA family pseudouridine synthase low > 63
Rhodanobacter denitrificans FW104-10B01 0.21 LRK54_RS04520 Rieske 2Fe-2S domain-containing protein 0.45 LRK54_RS17895 RluA family pseudouridine synthase low > 59
Dyella japonica UNC79MFTsu3.2 0.21 ABZR86_RS00370 aromatic ring-hydroxylating dioxygenase subunit alpha 0.42 ABZR86_RS02725 RluA family pseudouridine synthase low > 74
Caulobacter crescentus NA1000 0.19 CCNA_03222 ring hydroxylating dioxygenase, alpha-subunit 0.24 CCNA_02059 ribosomal large subunit pseudouridine synthase C low > 66
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_03222 ring hydroxylating dioxygenase, alpha-subunit 0.24 CCNA_02059 ribosomal large subunit pseudouridine synthase C low > 67
Lysobacter sp. OAE881 0.19 ABIE51_RS14635 aromatic ring-hydroxylating dioxygenase subunit alpha 0.43 ABIE51_RS11800 RluA family pseudouridine synthase low > 62
Pseudomonas putida KT2440 0.17 PP_5373 Rieske 2Fe-2S family protein 0.55 PP_1906 ribosomal large subunit pseudouridine synthase C low > 96
Dinoroseobacter shibae DFL-12 0.14 Dshi_1782 Rieske (2Fe-2S) domain protein (RefSeq) 0.23 Dshi_0315 pseudouridine synthase, RluA family (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.14 PGA1_262p01370 putative dioxygenase 0.25 PGA1_c01950 ribosomal large subunit pseudouridine synthase C — —
Herbaspirillum seropedicae SmR1 0.12 HSERO_RS19140 Rieske (2Fe-2S) protein 0.47 HSERO_RS09415 ribosomal large subunit pseudouridine synthase C low > 78
Acidovorax sp. GW101-3H11 0.12 Ac3H11_3563 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 0.43 Ac3H11_1590 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) low > 79
Ralstonia sp. UNC404CL21Col 0.11 ABZR87_RS15650 aromatic ring-hydroxylating dioxygenase subunit alpha 0.46 ABZR87_RS10090 RluA family pseudouridine synthase low > 80
Castellaniella sp019104865 MT123 0.11 ABCV34_RS02220 aromatic ring-hydroxylating dioxygenase subunit alpha 0.42 ABCV34_RS08415 RluA family pseudouridine synthase low > 48
Shewanella loihica PV-4 0.11 Shew_1330 Rieske (2Fe-2S) domain-containing protein (RefSeq) 0.66 Shew_1594 RluA family pseudouridine synthase (RefSeq) low > 60
Dechlorosoma suillum PS 0.10 Dsui_3507 ring-hydroxylating dioxygenase, large terminal subunit 0.47 Dsui_2437 pseudouridine synthase, RluA family low > 51
Alteromonas macleodii MIT1002 0.10 MIT1002_02598 Naphthalene 1,2-dioxygenase subunit alpha 0.63 MIT1002_01725 Ribosomal large subunit pseudouridine synthase C low > 70

Not shown: 2 genomes with orthologs for b1802 only; 54 genomes with orthologs for b1086 only